Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 AC005562.1-201ENST00000583030 3219 ntBASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 KRT8P14-201ENST00000414254 1442 ntBASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 NUTM2HP-201ENST00000442076 2498 ntBASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 AL589987.1-201ENST00000453380 819 ntBASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 AC023794.5-201ENST00000564380 2157 ntBASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AMBRA1Q9C0C7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms