Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 AC098859.1-201ENST00000502915 1238 ntBASIC12.07□□□□□ -0.48
NKX6-2Q9C056 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.07□□□□□ -0.48
NKX6-2Q9C056 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 OR7E47P-204ENST00000575924 449 ntBASIC12.07□□□□□ -0.48
NKX6-2Q9C056 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 AL356488.2-201ENST00000602755 427 ntBASIC12.07□□□□□ -0.48
NKX6-2Q9C056 AC092119.3-201ENST00000612618 583 ntBASIC12.07□□□□□ -0.48
NKX6-2Q9C056 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.07□□□□□ -0.48
NKX6-2Q9C056 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 MKRN5P-201ENST00000445263 1467 ntBASIC12.07□□□□□ -0.48
NKX6-2Q9C056 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX6-2Q9C056 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 PHKG1P2-201ENST00000457537 863 ntBASIC12.06□□□□□ -0.48
NKX6-2Q9C056 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 LINC01711-201ENST00000598340 967 ntBASIC12.06□□□□□ -0.48
NKX6-2Q9C056 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 REXO1L6P-202ENST00000619970 1078 ntBASIC12.06□□□□□ -0.48
NKX6-2Q9C056 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms