Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 RN7SL494P-201ENST00000461517 304 ntBASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 DUX4L50-201ENST00000455245 715 ntBASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 AL118522.1-201ENST00000611368 560 ntBASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CFAP43Q8NDM7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 OR8T1P-201ENST00000421347 918 ntBASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 BRI3P1-201ENST00000440440 378 ntBASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 RPL35P9-201ENST00000446059 350 ntBASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 HERC2P11-201ENST00000562845 725 ntBASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 AC100756.2-201ENST00000569537 736 ntBASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 FTLP5-201ENST00000586853 534 ntBASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 AC006483.2-201ENST00000609813 515 ntBASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CFAP43Q8NDM7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 AC093826.1-201ENST00000508655 993 ntBASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 SIGLEC22P-201ENST00000599104 714 ntBASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 MIR6074-201ENST00000612054 107 ntBASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 MIR6746-201ENST00000620971 63 ntBASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP43Q8NDM7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC22.49■■□□□ 1.19
CFAP43Q8NDM7 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CFAP43Q8NDM7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CFAP43Q8NDM7 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC22.49■■□□□ 1.19
CFAP43Q8NDM7 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CFAP43Q8NDM7 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CFAP43Q8NDM7 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC22.49■■□□□ 1.19
CFAP43Q8NDM7 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC22.49■■□□□ 1.19
CFAP43Q8NDM7 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC22.49■■□□□ 1.19
CFAP43Q8NDM7 RN7SL23P-201ENST00000484055 275 ntBASIC22.49■■□□□ 1.19
CFAP43Q8NDM7 CISD2-202ENST00000503643 808 ntTSL 2 BASIC22.49■■□□□ 1.19
CFAP43Q8NDM7 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC22.49■■□□□ 1.19
CFAP43Q8NDM7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC22.49■■□□□ 1.19
CFAP43Q8NDM7 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC22.49■■□□□ 1.19
CFAP43Q8NDM7 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CFAP43Q8NDM7 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC22.49■■□□□ 1.19
CFAP43Q8NDM7 AC006548.2-201ENST00000605217 529 ntBASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms