Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 SPDYE12P-201ENST00000618416 771 ntBASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NUDCD3Q8IVD9 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 TCAF1P1-201ENST00000414990 2232 ntBASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 AL353779.1-201ENST00000434793 351 ntBASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 AC044860.1-202ENST00000559481 777 ntBASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NUDCD3Q8IVD9 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 MYADML-201ENST00000474610 2147 ntBASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 462.4 ms