Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 RNU1-114P-201ENST00000365297 166 ntBASIC15.22■□□□□ 0.03
CASC4Q6P4E1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 TPT1P11-201ENST00000458482 498 ntBASIC15.22■□□□□ 0.03
CASC4Q6P4E1 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 AC022616.1-201ENST00000518688 554 ntBASIC15.22■□□□□ 0.03
CASC4Q6P4E1 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 AC093726.1-201ENST00000608064 963 ntBASIC15.22■□□□□ 0.03
CASC4Q6P4E1 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 KRT8P14-201ENST00000414254 1442 ntBASIC15.22■□□□□ 0.03
CASC4Q6P4E1 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 HSPA7-201ENST00000445535 1927 ntBASIC15.21■□□□□ 0.03
CASC4Q6P4E1 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 AC006504.5-208ENST00000588784 2401 ntBASIC15.21■□□□□ 0.03
CASC4Q6P4E1 KRT8P22-201ENST00000562317 1415 ntBASIC15.21■□□□□ 0.03
CASC4Q6P4E1 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 PMS2P2-201ENST00000425039 1128 ntBASIC15.21■□□□□ 0.03
CASC4Q6P4E1 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 AC123567.1-201ENST00000548294 1261 ntBASIC15.21■□□□□ 0.03
CASC4Q6P4E1 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 AL359711.2-201ENST00000563105 872 ntBASIC15.21■□□□□ 0.03
CASC4Q6P4E1 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 AC099568.2-201ENST00000609194 695 ntBASIC15.21■□□□□ 0.03
CASC4Q6P4E1 AC008761.3-201ENST00000624803 892 ntBASIC15.21■□□□□ 0.03
CASC4Q6P4E1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 PRSS30P-206ENST00000641773 873 ntBASIC15.21■□□□□ 0.03
CASC4Q6P4E1 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 LRRC59-203ENST00000576448 1531 ntBASIC15.21■□□□□ 0.03
CASC4Q6P4E1 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.21■□□□□ 0.03
CASC4Q6P4E1 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
CASC4Q6P4E1 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CASC4Q6P4E1 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CASC4Q6P4E1 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
CASC4Q6P4E1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.21■□□□□ 0.02
CASC4Q6P4E1 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CASC4Q6P4E1 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CASC4Q6P4E1 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms