Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
HERC4Q5GLZ8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.64■□□□□ 0.25
HERC4Q5GLZ8 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HERC4Q5GLZ8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERC4Q5GLZ8 SALL4P5-201ENST00000419001 1760 ntBASIC16.64■□□□□ 0.25
HERC4Q5GLZ8 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.64■□□□□ 0.25
HERC4Q5GLZ8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERC4Q5GLZ8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERC4Q5GLZ8 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERC4Q5GLZ8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 AC139749.1-202ENST00000617529 3139 ntBASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 AC007969.1-201ENST00000433675 447 ntBASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 DUX4L45-201ENST00000566406 1057 ntBASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC4Q5GLZ8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 AC113367.3-201ENST00000508316 1912 ntBASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 MPRIPP1-201ENST00000452433 1089 ntBASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 RN7SL48P-201ENST00000579283 293 ntBASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 GNRHR2-203ENST00000581100 1187 ntBASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 FAM45BP-202ENST00000592932 1624 ntBASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC4Q5GLZ8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms