Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 AC022145.2-201ENST00000598203 171 ntBASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 AC018529.1-201ENST00000613063 361 ntBASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.43
ANKRD55Q3KP44 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.43
ANKRD55Q3KP44 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.4□□□□□ -0.43
ANKRD55Q3KP44 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
ANKRD55Q3KP44 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
ANKRD55Q3KP44 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ANKRD55Q3KP44 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
ANKRD55Q3KP44 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 AC004945.1-201ENST00000416738 983 ntBASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 RN7SL828P-201ENST00000607615 303 ntBASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.39□□□□□ -0.43
ANKRD55Q3KP44 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 KRT8P14-201ENST00000414254 1442 ntBASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms