Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HOXC5Q00444 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXC5Q00444 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXC5Q00444 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXC5Q00444 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
HOXC5Q00444 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.8□□□□□ -0.2
HOXC5Q00444 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HOXC5Q00444 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.8□□□□□ -0.2
HOXC5Q00444 AC236430.1-201ENST00000402231 743 ntBASIC13.8□□□□□ -0.2
HOXC5Q00444 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.8□□□□□ -0.2
HOXC5Q00444 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 EIF3FP3-201ENST00000434851 1086 ntBASIC13.8□□□□□ -0.2
HOXC5Q00444 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.8□□□□□ -0.2
HOXC5Q00444 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.8□□□□□ -0.2
HOXC5Q00444 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.8□□□□□ -0.2
HOXC5Q00444 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.8□□□□□ -0.2
HOXC5Q00444 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.8□□□□□ -0.2
HOXC5Q00444 AC022616.1-201ENST00000518688 554 ntBASIC13.8□□□□□ -0.2
HOXC5Q00444 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXC5Q00444 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.8□□□□□ -0.2
HOXC5Q00444 RN7SL204P-201ENST00000582831 262 ntBASIC13.8□□□□□ -0.2
HOXC5Q00444 AC133539.2-201ENST00000604757 467 ntBASIC13.8□□□□□ -0.2
HOXC5Q00444 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.8□□□□□ -0.2
HOXC5Q00444 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HOXC5Q00444 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HOXC5Q00444 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.8□□□□□ -0.2
HOXC5Q00444 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HOXC5Q00444 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC5Q00444 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HOXC5Q00444 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.79□□□□□ -0.2
HOXC5Q00444 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC5Q00444 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HOXC5Q00444 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.79□□□□□ -0.2
HOXC5Q00444 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC5Q00444 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC5Q00444 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC5Q00444 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.79□□□□□ -0.2
HOXC5Q00444 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC5Q00444 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
HOXC5Q00444 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC5Q00444 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC5Q00444 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC5Q00444 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
HOXC5Q00444 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HOXC5Q00444 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.79□□□□□ -0.2
HOXC5Q00444 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC5Q00444 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HOXC5Q00444 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC5Q00444 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC5Q00444 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.79□□□□□ -0.2
HOXC5Q00444 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC5Q00444 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC5Q00444 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.79□□□□□ -0.2
HOXC5Q00444 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.79□□□□□ -0.2
HOXC5Q00444 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.79□□□□□ -0.2
HOXC5Q00444 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.79□□□□□ -0.2
HOXC5Q00444 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
HOXC5Q00444 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC5Q00444 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC5Q00444 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
HOXC5Q00444 AC022447.6-201ENST00000515522 438 ntBASIC13.79□□□□□ -0.2
HOXC5Q00444 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC5Q00444 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC5Q00444 API5-211ENST00000534695 560 ntTSL 5 BASIC13.79□□□□□ -0.2
HOXC5Q00444 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC5Q00444 WASH4P-201ENST00000564273 1246 ntBASIC13.79□□□□□ -0.2
HOXC5Q00444 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.79□□□□□ -0.2
HOXC5Q00444 AC004466.1-201ENST00000599515 1080 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms