Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.47□□□□□ -0.09
YBX1P67809 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.47□□□□□ -0.09
YBX1P67809 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.47□□□□□ -0.09
YBX1P67809 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
YBX1P67809 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 AC011840.2-201ENST00000563063 1520 ntBASIC14.46□□□□□ -0.09
YBX1P67809 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
YBX1P67809 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
YBX1P67809 AC003102.2-201ENST00000589195 1469 ntBASIC14.46□□□□□ -0.09
YBX1P67809 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
YBX1P67809 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.46□□□□□ -0.09
YBX1P67809 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
YBX1P67809 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.46□□□□□ -0.09
YBX1P67809 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
YBX1P67809 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.46□□□□□ -0.09
YBX1P67809 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.46□□□□□ -0.09
YBX1P67809 ATP5G2P4-201ENST00000442175 420 ntBASIC14.46□□□□□ -0.09
YBX1P67809 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.46□□□□□ -0.09
YBX1P67809 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.46□□□□□ -0.09
YBX1P67809 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.46□□□□□ -0.09
YBX1P67809 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
YBX1P67809 AC017083.2-201ENST00000608069 979 ntBASIC14.46□□□□□ -0.09
YBX1P67809 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.46□□□□□ -0.09
YBX1P67809 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.46□□□□□ -0.09
YBX1P67809 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.46□□□□□ -0.09
YBX1P67809 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.46□□□□□ -0.09
YBX1P67809 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
YBX1P67809 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.46□□□□□ -0.1
YBX1P67809 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
YBX1P67809 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
YBX1P67809 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.46□□□□□ -0.1
YBX1P67809 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.46□□□□□ -0.1
YBX1P67809 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.46□□□□□ -0.1
YBX1P67809 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
YBX1P67809 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
YBX1P67809 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.46□□□□□ -0.1
YBX1P67809 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 AL354702.1-201ENST00000442006 1960 ntBASIC14.45□□□□□ -0.1
YBX1P67809 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.45□□□□□ -0.1
YBX1P67809 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 MBLAC2-202ENST00000514906 1936 ntBASIC14.45□□□□□ -0.1
YBX1P67809 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.45□□□□□ -0.1
YBX1P67809 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.45□□□□□ -0.1
YBX1P67809 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.45□□□□□ -0.1
YBX1P67809 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
YBX1P67809 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.45□□□□□ -0.1
YBX1P67809 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.45□□□□□ -0.1
YBX1P67809 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.45□□□□□ -0.1
YBX1P67809 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.45□□□□□ -0.1
YBX1P67809 MESTP3-201ENST00000503460 968 ntBASIC14.45□□□□□ -0.1
YBX1P67809 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.45□□□□□ -0.1
YBX1P67809 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.45□□□□□ -0.1
YBX1P67809 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.45□□□□□ -0.1
YBX1P67809 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.45□□□□□ -0.1
YBX1P67809 AC012617.1-204ENST00000586340 2305 ntBASIC14.45□□□□□ -0.1
YBX1P67809 OR10B1P-201ENST00000601666 907 ntBASIC14.45□□□□□ -0.1
YBX1P67809 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.45□□□□□ -0.1
YBX1P67809 AC006453.4-201ENST00000636949 1252 ntBASIC14.45□□□□□ -0.1
YBX1P67809 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms