Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH13P55290 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH13P55290 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH13P55290 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH13P55290 SPTLC1P1-201ENST00000447199 261 ntBASIC14.58□□□□□ -0.08
CDH13P55290 INGX-202ENST00000489074 768 ntBASIC14.58□□□□□ -0.08
CDH13P55290 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH13P55290 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CDH13P55290 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CDH13P55290 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH13P55290 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH13P55290 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.58□□□□□ -0.08
CDH13P55290 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.58□□□□□ -0.08
CDH13P55290 AC006538.3-201ENST00000612495 578 ntBASIC14.58□□□□□ -0.08
CDH13P55290 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH13P55290 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CDH13P55290 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH13P55290 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH13P55290 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH13P55290 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.58□□□□□ -0.08
CDH13P55290 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH13P55290 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH13P55290 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH13P55290 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH13P55290 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH13P55290 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CDH13P55290 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CDH13P55290 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH13P55290 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH13P55290 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH13P55290 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDH13P55290 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH13P55290 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH13P55290 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CDH13P55290 LRRC59-203ENST00000576448 1531 ntBASIC14.57□□□□□ -0.08
CDH13P55290 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH13P55290 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CDH13P55290 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDH13P55290 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH13P55290 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDH13P55290 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH13P55290 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH13P55290 SOCS2P1-201ENST00000417727 557 ntBASIC14.57□□□□□ -0.08
CDH13P55290 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH13P55290 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.57□□□□□ -0.08
CDH13P55290 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CDH13P55290 AC004466.1-201ENST00000599515 1080 ntBASIC14.57□□□□□ -0.08
CDH13P55290 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH13P55290 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.57□□□□□ -0.08
CDH13P55290 CHCHD2P3-201ENST00000603038 451 ntBASIC14.57□□□□□ -0.08
CDH13P55290 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDH13P55290 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH13P55290 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH13P55290 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH13P55290 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH13P55290 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDH13P55290 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH13P55290 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH13P55290 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH13P55290 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 MST1P2-201ENST00000457982 2291 ntBASIC14.56□□□□□ -0.08
CDH13P55290 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.56□□□□□ -0.08
CDH13P55290 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 GIMAP3P-201ENST00000495150 836 ntBASIC14.56□□□□□ -0.08
CDH13P55290 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.56□□□□□ -0.08
CDH13P55290 SERBP1P5-201ENST00000510079 1181 ntBASIC14.56□□□□□ -0.08
CDH13P55290 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.56□□□□□ -0.08
CDH13P55290 RNA5SP421-201ENST00000516864 134 ntBASIC14.56□□□□□ -0.08
CDH13P55290 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDH13P55290 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.56□□□□□ -0.08
CDH13P55290 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH13P55290 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms