Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC20.32■□□□□ 0.84
CPS1P31327 AL133467.4-201ENST00000602953 725 ntBASIC20.32■□□□□ 0.84
CPS1P31327 AC254633.1-201ENST00000606790 345 ntBASIC20.32■□□□□ 0.84
CPS1P31327 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC20.32■□□□□ 0.84
CPS1P31327 AC020922.4-201ENST00000621389 339 ntBASIC20.32■□□□□ 0.84
CPS1P31327 AC090386.2-201ENST00000623010 1039 ntBASIC20.32■□□□□ 0.84
CPS1P31327 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPS1P31327 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC20.32■□□□□ 0.84
CPS1P31327 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CPS1P31327 AL008638.4-201ENST00000624792 1315 ntBASIC20.31■□□□□ 0.84
CPS1P31327 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPS1P31327 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPS1P31327 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPS1P31327 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CPS1P31327 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPS1P31327 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC20.31■□□□□ 0.84
CPS1P31327 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC20.31■□□□□ 0.84
CPS1P31327 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPS1P31327 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPS1P31327 GOLGA6L16P-201ENST00000441780 1299 ntBASIC20.31■□□□□ 0.84
CPS1P31327 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CPS1P31327 ALG1L7P-201ENST00000502317 768 ntBASIC20.31■□□□□ 0.84
CPS1P31327 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC20.31■□□□□ 0.84
CPS1P31327 VENTXP3-201ENST00000546480 773 ntBASIC20.31■□□□□ 0.84
CPS1P31327 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC20.31■□□□□ 0.84
CPS1P31327 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPS1P31327 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC20.31■□□□□ 0.84
CPS1P31327 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPS1P31327 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPS1P31327 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CPS1P31327 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPS1P31327 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC20.31■□□□□ 0.84
CPS1P31327 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPS1P31327 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
CPS1P31327 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CPS1P31327 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPS1P31327 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPS1P31327 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CPS1P31327 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC20.3■□□□□ 0.84
CPS1P31327 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPS1P31327 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPS1P31327 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CPS1P31327 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPS1P31327 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CPS1P31327 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CPS1P31327 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CPS1P31327 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPS1P31327 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPS1P31327 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC20.3■□□□□ 0.84
CPS1P31327 AC004801.1-201ENST00000549557 360 ntBASIC20.3■□□□□ 0.84
CPS1P31327 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC20.3■□□□□ 0.84
CPS1P31327 AL357143.1-203ENST00000639750 881 ntBASIC20.3■□□□□ 0.84
CPS1P31327 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPS1P31327 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPS1P31327 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPS1P31327 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC20.3■□□□□ 0.84
CPS1P31327 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CPS1P31327 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC20.3■□□□□ 0.84
CPS1P31327 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPS1P31327 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC20.3■□□□□ 0.84
CPS1P31327 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPS1P31327 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CPS1P31327 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC20.3■□□□□ 0.84
CPS1P31327 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPS1P31327 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CPS1P31327 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPS1P31327 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC20.29■□□□□ 0.84
CPS1P31327 SAT1-201ENST00000379251 801 ntTSL 2 BASIC20.29■□□□□ 0.84
CPS1P31327 SAT1-202ENST00000379253 909 ntTSL 2 BASIC20.29■□□□□ 0.84
CPS1P31327 SAT1-203ENST00000379254 868 ntTSL 3 BASIC20.29■□□□□ 0.84
CPS1P31327 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPS1P31327 OR10N1P-201ENST00000392758 869 ntBASIC20.29■□□□□ 0.84
CPS1P31327 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC20.29■□□□□ 0.84
CPS1P31327 PSAT1P2-201ENST00000426107 972 ntBASIC20.29■□□□□ 0.84
CPS1P31327 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPS1P31327 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC20.29■□□□□ 0.84
CPS1P31327 CSTP2-201ENST00000610599 398 ntBASIC20.29■□□□□ 0.84
CPS1P31327 GGNBP1-204ENST00000613113 887 ntBASIC20.29■□□□□ 0.84
CPS1P31327 AL450487.2-201ENST00000615934 407 ntBASIC20.29■□□□□ 0.84
CPS1P31327 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPS1P31327 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPS1P31327 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC20.29■□□□□ 0.84
CPS1P31327 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPS1P31327 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CPS1P31327 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.29■□□□□ 0.84
CPS1P31327 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.29■□□□□ 0.84
CPS1P31327 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CPS1P31327 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC20.29■□□□□ 0.84
CPS1P31327 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPS1P31327 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CPS1P31327 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPS1P31327 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPS1P31327 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPS1P31327 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPS1P31327 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC20.28■□□□□ 0.84
CPS1P31327 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC20.28■□□□□ 0.84
CPS1P31327 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPS1P31327 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPS1P31327 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPS1P31327 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms