Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RB1P06400 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RB1P06400 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RB1P06400 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RB1P06400 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RB1P06400 AC013726.1-201ENST00000563747 2285 ntBASIC15.52■□□□□ 0.08
RB1P06400 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RB1P06400 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RB1P06400 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RB1P06400 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.52■□□□□ 0.08
RB1P06400 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RB1P06400 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.52■□□□□ 0.08
RB1P06400 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RB1P06400 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RB1P06400 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RB1P06400 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
RB1P06400 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RB1P06400 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.52■□□□□ 0.08
RB1P06400 GCSHP3-201ENST00000431120 391 ntBASIC15.52■□□□□ 0.08
RB1P06400 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.52■□□□□ 0.08
RB1P06400 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RB1P06400 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.52■□□□□ 0.08
RB1P06400 AC024293.1-201ENST00000467930 498 ntBASIC15.52■□□□□ 0.08
RB1P06400 RNA5SP417-201ENST00000516459 108 ntBASIC15.52■□□□□ 0.08
RB1P06400 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.52■□□□□ 0.08
RB1P06400 HERC2P11-201ENST00000562845 725 ntBASIC15.52■□□□□ 0.08
RB1P06400 AC124068.2-201ENST00000569473 1109 ntBASIC15.52■□□□□ 0.08
RB1P06400 AC100756.2-201ENST00000569537 736 ntBASIC15.52■□□□□ 0.08
RB1P06400 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.52■□□□□ 0.08
RB1P06400 MIR5196-201ENST00000578146 115 ntBASIC15.52■□□□□ 0.08
RB1P06400 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.52■□□□□ 0.08
RB1P06400 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RB1P06400 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC15.52■□□□□ 0.08
RB1P06400 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RB1P06400 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RB1P06400 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RB1P06400 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RB1P06400 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
RB1P06400 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RB1P06400 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RB1P06400 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RB1P06400 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RB1P06400 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RB1P06400 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RB1P06400 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RB1P06400 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
RB1P06400 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RB1P06400 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RB1P06400 REXO1L2P-201ENST00000425429 2069 ntBASIC15.52■□□□□ 0.07
RB1P06400 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.51■□□□□ 0.07
RB1P06400 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 KRT8P28-201ENST00000433288 1390 ntBASIC15.51■□□□□ 0.07
RB1P06400 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 IL9RP3-201ENST00000442856 1674 ntBASIC15.51■□□□□ 0.07
RB1P06400 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC15.51■□□□□ 0.07
RB1P06400 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 PRAL-201ENST00000624952 3286 ntBASIC15.51■□□□□ 0.07
RB1P06400 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.51■□□□□ 0.07
RB1P06400 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.51■□□□□ 0.07
RB1P06400 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.51■□□□□ 0.07
RB1P06400 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.51■□□□□ 0.07
RB1P06400 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RB1P06400 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.51■□□□□ 0.07
RB1P06400 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.51■□□□□ 0.07
RB1P06400 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.51■□□□□ 0.07
RB1P06400 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.51■□□□□ 0.07
RB1P06400 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.51■□□□□ 0.07
RB1P06400 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.51■□□□□ 0.07
RB1P06400 RNF146-211ENST00000609447 607 ntTSL 4 BASIC15.51■□□□□ 0.07
RB1P06400 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RB1P06400 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RB1P06400 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RB1P06400 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RB1P06400 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.5■□□□□ 0.07
RB1P06400 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.5■□□□□ 0.07
RB1P06400 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RB1P06400 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms