Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC18.96■□□□□ 0.63
COL5A2P05997 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.96■□□□□ 0.63
COL5A2P05997 AP000769.1-203ENST00000637245 208 ntBASIC18.96■□□□□ 0.63
COL5A2P05997 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.95■□□□□ 0.62
COL5A2P05997 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL5A2P05997 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.95■□□□□ 0.62
COL5A2P05997 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL5A2P05997 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL5A2P05997 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL5A2P05997 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL5A2P05997 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL5A2P05997 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
COL5A2P05997 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
COL5A2P05997 AL162727.3-201ENST00000635661 2787 ntBASIC18.95■□□□□ 0.62
COL5A2P05997 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC18.95■□□□□ 0.62
COL5A2P05997 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL5A2P05997 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL5A2P05997 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL5A2P05997 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL5A2P05997 HNRNPA1P58-201ENST00000403629 610 ntBASIC18.95■□□□□ 0.62
COL5A2P05997 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC18.95■□□□□ 0.62
COL5A2P05997 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC18.95■□□□□ 0.62
COL5A2P05997 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC18.95■□□□□ 0.62
COL5A2P05997 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC18.95■□□□□ 0.62
COL5A2P05997 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC18.95■□□□□ 0.62
COL5A2P05997 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL5A2P05997 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL5A2P05997 APOC1-209ENST00000592885 562 ntTSL 3 BASIC18.95■□□□□ 0.62
COL5A2P05997 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL5A2P05997 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC18.95■□□□□ 0.62
COL5A2P05997 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC18.95■□□□□ 0.62
COL5A2P05997 HPX-213ENST00000615166 826 ntTSL 5 BASIC18.95■□□□□ 0.62
COL5A2P05997 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC18.95■□□□□ 0.62
COL5A2P05997 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL5A2P05997 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC18.95■□□□□ 0.62
COL5A2P05997 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL5A2P05997 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.95■□□□□ 0.62
COL5A2P05997 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.95■□□□□ 0.62
COL5A2P05997 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL5A2P05997 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC18.95■□□□□ 0.62
COL5A2P05997 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL5A2P05997 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL5A2P05997 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.95■□□□□ 0.62
COL5A2P05997 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.95■□□□□ 0.62
COL5A2P05997 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18.95■□□□□ 0.62
COL5A2P05997 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.94■□□□□ 0.62
COL5A2P05997 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL5A2P05997 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL5A2P05997 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COL5A2P05997 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC18.94■□□□□ 0.62
COL5A2P05997 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL5A2P05997 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL5A2P05997 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COL5A2P05997 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COL5A2P05997 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL5A2P05997 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
COL5A2P05997 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
COL5A2P05997 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL5A2P05997 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
COL5A2P05997 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL5A2P05997 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC18.94■□□□□ 0.62
COL5A2P05997 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL5A2P05997 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC18.94■□□□□ 0.62
COL5A2P05997 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL5A2P05997 AL512599.1-201ENST00000430724 685 ntBASIC18.94■□□□□ 0.62
COL5A2P05997 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC18.94■□□□□ 0.62
COL5A2P05997 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL5A2P05997 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC18.94■□□□□ 0.62
COL5A2P05997 AL451000.1-201ENST00000451300 1186 ntBASIC18.94■□□□□ 0.62
COL5A2P05997 RN7SL375P-201ENST00000492442 298 ntBASIC18.94■□□□□ 0.62
COL5A2P05997 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC18.94■□□□□ 0.62
COL5A2P05997 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC18.94■□□□□ 0.62
COL5A2P05997 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
COL5A2P05997 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COL5A2P05997 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.94■□□□□ 0.62
COL5A2P05997 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL5A2P05997 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.94■□□□□ 0.62
COL5A2P05997 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL5A2P05997 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.94■□□□□ 0.62
COL5A2P05997 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.94■□□□□ 0.62
COL5A2P05997 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.93■□□□□ 0.62
COL5A2P05997 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL5A2P05997 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.93■□□□□ 0.62
COL5A2P05997 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
COL5A2P05997 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC18.93■□□□□ 0.62
COL5A2P05997 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL5A2P05997 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL5A2P05997 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL5A2P05997 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL5A2P05997 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC18.93■□□□□ 0.62
COL5A2P05997 AC092573.1-201ENST00000433054 884 ntBASIC18.93■□□□□ 0.62
COL5A2P05997 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC18.93■□□□□ 0.62
COL5A2P05997 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC18.93■□□□□ 0.62
COL5A2P05997 SORD2P-201ENST00000558556 1069 ntBASIC18.93■□□□□ 0.62
COL5A2P05997 AL160191.2-201ENST00000603975 601 ntBASIC18.93■□□□□ 0.62
COL5A2P05997 AL359091.4-201ENST00000610052 409 ntBASIC18.93■□□□□ 0.62
COL5A2P05997 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC18.93■□□□□ 0.62
COL5A2P05997 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL5A2P05997 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL5A2P05997 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms