Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TUBB4AP04350 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.95■□□□□ 0.14
TUBB4AP04350 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TUBB4AP04350 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TUBB4AP04350 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TUBB4AP04350 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TUBB4AP04350 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.95■□□□□ 0.14
TUBB4AP04350 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.95■□□□□ 0.14
TUBB4AP04350 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.95■□□□□ 0.14
TUBB4AP04350 AL671883.3-201ENST00000603274 991 ntBASIC15.95■□□□□ 0.14
TUBB4AP04350 AC055717.3-201ENST00000622967 595 ntBASIC15.95■□□□□ 0.14
TUBB4AP04350 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TUBB4AP04350 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.95■□□□□ 0.14
TUBB4AP04350 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TUBB4AP04350 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TUBB4AP04350 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TUBB4AP04350 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 OS9-206ENST00000435406 2346 ntTSL 2 BASIC15.95■□□□□ 0.14
TUBB4AP04350 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
TUBB4AP04350 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBB4AP04350 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TUBB4AP04350 AC019294.4-201ENST00000561777 2905 ntBASIC15.95■□□□□ 0.14
TUBB4AP04350 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TUBB4AP04350 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.94■□□□□ 0.14
TUBB4AP04350 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBB4AP04350 AL157996.1-201ENST00000624684 2299 ntBASIC15.94■□□□□ 0.14
TUBB4AP04350 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBB4AP04350 Z98257.2-202ENST00000641138 1548 ntBASIC15.94■□□□□ 0.14
TUBB4AP04350 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.94■□□□□ 0.14
TUBB4AP04350 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBB4AP04350 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBB4AP04350 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TUBB4AP04350 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TUBB4AP04350 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TUBB4AP04350 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBB4AP04350 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.94■□□□□ 0.14
TUBB4AP04350 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC15.94■□□□□ 0.14
TUBB4AP04350 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TUBB4AP04350 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TUBB4AP04350 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBB4AP04350 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TUBB4AP04350 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TUBB4AP04350 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.94■□□□□ 0.14
TUBB4AP04350 SPDYE11-202ENST00000450699 704 ntBASIC15.94■□□□□ 0.14
TUBB4AP04350 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.94■□□□□ 0.14
TUBB4AP04350 SPDYE9P-201ENST00000570642 692 ntBASIC15.94■□□□□ 0.14
TUBB4AP04350 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.94■□□□□ 0.14
TUBB4AP04350 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.94■□□□□ 0.14
TUBB4AP04350 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.94■□□□□ 0.14
TUBB4AP04350 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.94■□□□□ 0.14
TUBB4AP04350 SPDYE10P-202ENST00000612005 668 ntBASIC15.94■□□□□ 0.14
TUBB4AP04350 SPDYE8P-202ENST00000612377 668 ntBASIC15.94■□□□□ 0.14
TUBB4AP04350 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TUBB4AP04350 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TUBB4AP04350 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TUBB4AP04350 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBB4AP04350 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC15.94■□□□□ 0.14
TUBB4AP04350 Z82170.1-201ENST00000625081 3192 ntBASIC15.94■□□□□ 0.14
TUBB4AP04350 PEG13-201ENST00000631594 5667 ntBASIC15.94■□□□□ 0.14
TUBB4AP04350 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBB4AP04350 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC15.94■□□□□ 0.14
TUBB4AP04350 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.94■□□□□ 0.14
TUBB4AP04350 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TUBB4AP04350 AC011498.7-201ENST00000624986 2027 ntBASIC15.94■□□□□ 0.14
TUBB4AP04350 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBB4AP04350 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TUBB4AP04350 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TUBB4AP04350 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TUBB4AP04350 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC15.93■□□□□ 0.14
TUBB4AP04350 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC15.93■□□□□ 0.14
TUBB4AP04350 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TUBB4AP04350 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC15.93■□□□□ 0.14
TUBB4AP04350 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TUBB4AP04350 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TUBB4AP04350 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.93■□□□□ 0.14
TUBB4AP04350 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TUBB4AP04350 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC15.93■□□□□ 0.14
TUBB4AP04350 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TUBB4AP04350 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TUBB4AP04350 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
TUBB4AP04350 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TUBB4AP04350 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.93■□□□□ 0.14
TUBB4AP04350 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms