Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CD74P04233 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CD74P04233 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CD74P04233 AC023274.1-201ENST00000418278 595 ntBASIC12.51□□□□□ -0.41
CD74P04233 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
CD74P04233 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
CD74P04233 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.51□□□□□ -0.41
CD74P04233 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.51□□□□□ -0.41
CD74P04233 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.51□□□□□ -0.41
CD74P04233 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.51□□□□□ -0.41
CD74P04233 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CD74P04233 DUX4L47-201ENST00000566374 394 ntBASIC12.51□□□□□ -0.41
CD74P04233 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
CD74P04233 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.51□□□□□ -0.41
CD74P04233 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.51□□□□□ -0.41
CD74P04233 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
CD74P04233 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.51□□□□□ -0.41
CD74P04233 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CD74P04233 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.51□□□□□ -0.41
CD74P04233 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
CD74P04233 AL157996.1-201ENST00000624684 2299 ntBASIC12.51□□□□□ -0.41
CD74P04233 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.51□□□□□ -0.41
CD74P04233 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CD74P04233 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.51□□□□□ -0.41
CD74P04233 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.51□□□□□ -0.41
CD74P04233 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.51□□□□□ -0.41
CD74P04233 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CD74P04233 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CD74P04233 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.5□□□□□ -0.41
CD74P04233 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
CD74P04233 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CD74P04233 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.5□□□□□ -0.41
CD74P04233 TLE1P1-201ENST00000422965 589 ntBASIC12.5□□□□□ -0.41
CD74P04233 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.5□□□□□ -0.41
CD74P04233 RBPMS2P1-201ENST00000437762 623 ntBASIC12.5□□□□□ -0.41
CD74P04233 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.5□□□□□ -0.41
CD74P04233 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.5□□□□□ -0.41
CD74P04233 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.5□□□□□ -0.41
CD74P04233 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.5□□□□□ -0.41
CD74P04233 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CD74P04233 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.5□□□□□ -0.41
CD74P04233 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.5□□□□□ -0.41
CD74P04233 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.5□□□□□ -0.41
CD74P04233 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.5□□□□□ -0.41
CD74P04233 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.5□□□□□ -0.41
CD74P04233 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.5□□□□□ -0.41
CD74P04233 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
CD74P04233 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.5□□□□□ -0.41
CD74P04233 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.5□□□□□ -0.41
CD74P04233 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.5□□□□□ -0.41
CD74P04233 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD74P04233 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms