Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 KRT8P28-201ENST00000433288 1390 ntBASIC16.17■□□□□ 0.18
VTNP04004 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTNP04004 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTNP04004 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VTNP04004 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VTNP04004 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.17■□□□□ 0.18
VTNP04004 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.17■□□□□ 0.18
VTNP04004 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.17■□□□□ 0.18
VTNP04004 AC020922.3-201ENST00000595064 547 ntBASIC16.17■□□□□ 0.18
VTNP04004 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.17■□□□□ 0.18
VTNP04004 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.17■□□□□ 0.18
VTNP04004 AL157813.1-201ENST00000612996 587 ntBASIC16.17■□□□□ 0.18
VTNP04004 AC079336.7-201ENST00000623428 1078 ntBASIC16.17■□□□□ 0.18
VTNP04004 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.17■□□□□ 0.18
VTNP04004 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTNP04004 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTNP04004 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VTNP04004 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTNP04004 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.17■□□□□ 0.18
VTNP04004 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.17■□□□□ 0.18
VTNP04004 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
VTNP04004 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTNP04004 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTNP04004 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.17■□□□□ 0.18
VTNP04004 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VTNP04004 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTNP04004 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTNP04004 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
VTNP04004 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VTNP04004 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
VTNP04004 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.16■□□□□ 0.18
VTNP04004 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
VTNP04004 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VTNP04004 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
VTNP04004 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VTNP04004 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.16■□□□□ 0.18
VTNP04004 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VTNP04004 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VTNP04004 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VTNP04004 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VTNP04004 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VTNP04004 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
VTNP04004 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VTNP04004 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
VTNP04004 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VTNP04004 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.16■□□□□ 0.18
VTNP04004 AC007274.2-201ENST00000421675 662 ntBASIC16.16■□□□□ 0.18
VTNP04004 PDIA3P2-201ENST00000428073 158 ntBASIC16.16■□□□□ 0.18
VTNP04004 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VTNP04004 AC073150.1-201ENST00000450406 1084 ntBASIC16.16■□□□□ 0.18
VTNP04004 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.16■□□□□ 0.18
VTNP04004 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.16■□□□□ 0.18
VTNP04004 AC133540.1-201ENST00000620845 1019 ntBASIC16.16■□□□□ 0.18
VTNP04004 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VTNP04004 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
VTNP04004 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VTNP04004 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VTNP04004 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.16■□□□□ 0.18
VTNP04004 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VTNP04004 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VTNP04004 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VTNP04004 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VTNP04004 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VTNP04004 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VTNP04004 KRT8P21-201ENST00000430398 1491 ntBASIC16.16■□□□□ 0.18
VTNP04004 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VTNP04004 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VTNP04004 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VTNP04004 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.15■□□□□ 0.18
VTNP04004 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
VTNP04004 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.15■□□□□ 0.18
VTNP04004 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VTNP04004 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.15■□□□□ 0.18
VTNP04004 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
VTNP04004 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
VTNP04004 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
VTNP04004 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
VTNP04004 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VTNP04004 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VTNP04004 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VTNP04004 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.15■□□□□ 0.18
VTNP04004 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.15■□□□□ 0.18
VTNP04004 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.15■□□□□ 0.18
VTNP04004 AC139712.1-201ENST00000378256 1875 ntBASIC16.15■□□□□ 0.18
VTNP04004 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VTNP04004 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.15■□□□□ 0.18
VTNP04004 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VTNP04004 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
VTNP04004 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VTNP04004 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.15■□□□□ 0.18
VTNP04004 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.15■□□□□ 0.18
VTNP04004 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
VTNP04004 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
VTNP04004 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.15■□□□□ 0.18
VTNP04004 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.15■□□□□ 0.18
VTNP04004 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.15■□□□□ 0.18
VTNP04004 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VTNP04004 MIR3907-201ENST00000579424 151 ntBASIC16.15■□□□□ 0.18
VTNP04004 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
VTNP04004 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms