Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF40O75150 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF40O75150 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RNF40O75150 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF40O75150 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF40O75150 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF40O75150 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF40O75150 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF40O75150 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF40O75150 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
RNF40O75150 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RNF40O75150 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
RNF40O75150 AC152010.1-201ENST00000415779 2006 ntBASIC16.16■□□□□ 0.18
RNF40O75150 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF40O75150 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF40O75150 AC011474.4-201ENST00000623523 2076 ntBASIC16.16■□□□□ 0.18
RNF40O75150 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF40O75150 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF40O75150 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RNF40O75150 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF40O75150 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RNF40O75150 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF40O75150 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF40O75150 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF40O75150 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF40O75150 KLF2P4-201ENST00000451959 1225 ntBASIC16.16■□□□□ 0.18
RNF40O75150 FAM86LP-201ENST00000478302 853 ntBASIC16.16■□□□□ 0.18
RNF40O75150 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF40O75150 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.16■□□□□ 0.18
RNF40O75150 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF40O75150 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
RNF40O75150 MIR4313-201ENST00000580760 101 ntBASIC16.16■□□□□ 0.18
RNF40O75150 MIR4538-201ENST00000581377 78 ntBASIC16.16■□□□□ 0.18
RNF40O75150 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RNF40O75150 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF40O75150 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF40O75150 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RNF40O75150 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF40O75150 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RNF40O75150 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF40O75150 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF40O75150 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RNF40O75150 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF40O75150 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF40O75150 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF40O75150 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF40O75150 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF40O75150 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF40O75150 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF40O75150 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
RNF40O75150 AL356585.2-201ENST00000625078 2396 ntBASIC16.15■□□□□ 0.18
RNF40O75150 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF40O75150 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
RNF40O75150 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF40O75150 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF40O75150 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
RNF40O75150 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF40O75150 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RNF40O75150 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RNF40O75150 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF40O75150 AC074338.1-201ENST00000416825 156 ntBASIC16.15■□□□□ 0.18
RNF40O75150 ACTG1P3-201ENST00000431775 1114 ntBASIC16.15■□□□□ 0.18
RNF40O75150 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF40O75150 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF40O75150 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF40O75150 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RNF40O75150 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.15■□□□□ 0.18
RNF40O75150 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.15■□□□□ 0.18
RNF40O75150 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RNF40O75150 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF40O75150 AL359711.2-201ENST00000563105 872 ntBASIC16.15■□□□□ 0.18
RNF40O75150 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF40O75150 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF40O75150 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF40O75150 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF40O75150 AL022328.1-201ENST00000610050 478 ntBASIC16.15■□□□□ 0.18
RNF40O75150 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
RNF40O75150 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms