Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
OPHN1O60890 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.6■□□□□ 0.09
OPHN1O60890 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
OPHN1O60890 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.6■□□□□ 0.09
OPHN1O60890 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.6■□□□□ 0.09
OPHN1O60890 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
OPHN1O60890 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.6■□□□□ 0.09
OPHN1O60890 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.6■□□□□ 0.09
OPHN1O60890 AP001889.1-201ENST00000525414 633 ntBASIC15.6■□□□□ 0.09
OPHN1O60890 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.6■□□□□ 0.09
OPHN1O60890 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.6■□□□□ 0.09
OPHN1O60890 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.6■□□□□ 0.09
OPHN1O60890 AP000812.2-201ENST00000538934 718 ntBASIC15.6■□□□□ 0.09
OPHN1O60890 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
OPHN1O60890 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.6■□□□□ 0.09
OPHN1O60890 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.6■□□□□ 0.09
OPHN1O60890 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
OPHN1O60890 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
OPHN1O60890 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
OPHN1O60890 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
OPHN1O60890 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
OPHN1O60890 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.6■□□□□ 0.09
OPHN1O60890 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
OPHN1O60890 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
OPHN1O60890 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
OPHN1O60890 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.6■□□□□ 0.09
OPHN1O60890 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
OPHN1O60890 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
OPHN1O60890 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
OPHN1O60890 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
OPHN1O60890 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
OPHN1O60890 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.59■□□□□ 0.09
OPHN1O60890 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
OPHN1O60890 LINC00552-201ENST00000625151 2579 ntBASIC15.59■□□□□ 0.09
OPHN1O60890 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
OPHN1O60890 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
OPHN1O60890 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.59■□□□□ 0.09
OPHN1O60890 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
OPHN1O60890 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.59■□□□□ 0.09
OPHN1O60890 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
OPHN1O60890 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.59■□□□□ 0.09
OPHN1O60890 GOLGA2P4-201ENST00000441462 777 ntBASIC15.59■□□□□ 0.09
OPHN1O60890 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.59■□□□□ 0.09
OPHN1O60890 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.59■□□□□ 0.09
OPHN1O60890 VDAC1P7-201ENST00000462417 847 ntBASIC15.59■□□□□ 0.09
OPHN1O60890 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.59■□□□□ 0.09
OPHN1O60890 AC009486.1-201ENST00000569860 813 ntBASIC15.59■□□□□ 0.09
OPHN1O60890 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.59■□□□□ 0.09
OPHN1O60890 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
OPHN1O60890 MIR3615-201ENST00000581999 87 ntBASIC15.59■□□□□ 0.09
OPHN1O60890 AC093813.1-201ENST00000605066 256 ntBASIC15.59■□□□□ 0.09
OPHN1O60890 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.59■□□□□ 0.09
OPHN1O60890 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.59■□□□□ 0.09
OPHN1O60890 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.59■□□□□ 0.09
OPHN1O60890 AL139099.5-201ENST00000635274 300 ntBASIC15.59■□□□□ 0.09
OPHN1O60890 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
OPHN1O60890 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.59■□□□□ 0.09
OPHN1O60890 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
OPHN1O60890 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.59■□□□□ 0.09
OPHN1O60890 AC005840.4-201ENST00000541242 2494 ntBASIC15.59■□□□□ 0.09
OPHN1O60890 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
OPHN1O60890 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.59■□□□□ 0.09
OPHN1O60890 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.59■□□□□ 0.09
OPHN1O60890 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
OPHN1O60890 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
OPHN1O60890 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
OPHN1O60890 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
OPHN1O60890 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
OPHN1O60890 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.59■□□□□ 0.09
OPHN1O60890 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
OPHN1O60890 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
OPHN1O60890 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
OPHN1O60890 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
OPHN1O60890 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
OPHN1O60890 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
OPHN1O60890 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.58■□□□□ 0.09
OPHN1O60890 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
OPHN1O60890 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.58■□□□□ 0.09
OPHN1O60890 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
OPHN1O60890 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
OPHN1O60890 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.58■□□□□ 0.09
OPHN1O60890 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
OPHN1O60890 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.58■□□□□ 0.08
OPHN1O60890 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
OPHN1O60890 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
OPHN1O60890 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 AC092506.1-202ENST00000401022 528 ntBASIC15.58■□□□□ 0.08
OPHN1O60890 MIR1247-201ENST00000408206 136 ntBASIC15.58■□□□□ 0.08
OPHN1O60890 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.58■□□□□ 0.08
OPHN1O60890 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.58■□□□□ 0.08
OPHN1O60890 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
OPHN1O60890 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.58■□□□□ 0.08
OPHN1O60890 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms