Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RIPK2O43353 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC15.1■□□□□ 0.01
RIPK2O43353 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
RIPK2O43353 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RIPK2O43353 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
RIPK2O43353 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.1■□□□□ 0.01
RIPK2O43353 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RIPK2O43353 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RIPK2O43353 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.1■□□□□ 0.01
RIPK2O43353 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RIPK2O43353 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RIPK2O43353 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RIPK2O43353 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RIPK2O43353 AC003102.2-201ENST00000589195 1469 ntBASIC15.1■□□□□ 0.01
RIPK2O43353 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RIPK2O43353 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RIPK2O43353 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.1■□□□□ 0.01
RIPK2O43353 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RIPK2O43353 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RIPK2O43353 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RIPK2O43353 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RIPK2O43353 AL139094.1-201ENST00000405549 1188 ntBASIC15.1■□□□□ 0.01
RIPK2O43353 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
RIPK2O43353 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.1■□□□□ 0.01
RIPK2O43353 AC114501.2-201ENST00000439631 535 ntBASIC15.1■□□□□ 0.01
RIPK2O43353 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.1■□□□□ 0.01
RIPK2O43353 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.1■□□□□ 0.01
RIPK2O43353 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.1■□□□□ 0.01
RIPK2O43353 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RIPK2O43353 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.1■□□□□ 0.01
RIPK2O43353 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.1■□□□□ 0.01
RIPK2O43353 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.1■□□□□ 0.01
RIPK2O43353 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.1■□□□□ 0.01
RIPK2O43353 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RIPK2O43353 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RIPK2O43353 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC15.1■□□□□ 0.01
RIPK2O43353 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RIPK2O43353 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RIPK2O43353 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.1■□□□□ 0.01
RIPK2O43353 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RIPK2O43353 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.1■□□□□ 0.01
RIPK2O43353 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.1■□□□□ 0.01
RIPK2O43353 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.1■□□□□ 0.01
RIPK2O43353 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RIPK2O43353 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RIPK2O43353 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RIPK2O43353 AC015688.4-201ENST00000580780 1647 ntBASIC15.1■□□□□ 0.01
RIPK2O43353 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RIPK2O43353 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.09■□□□□ 0.01
RIPK2O43353 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.09■□□□□ 0.01
RIPK2O43353 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.09■□□□□ 0.01
RIPK2O43353 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.09■□□□□ 0.01
RIPK2O43353 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.09■□□□□ 0.01
RIPK2O43353 TLE1P1-201ENST00000422965 589 ntBASIC15.09■□□□□ 0.01
RIPK2O43353 AC007969.1-201ENST00000433675 447 ntBASIC15.09■□□□□ 0.01
RIPK2O43353 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.09■□□□□ 0.01
RIPK2O43353 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RIPK2O43353 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
RIPK2O43353 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.09■□□□□ 0.01
RIPK2O43353 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.09■□□□□ 0.01
RIPK2O43353 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.09■□□□□ 0.01
RIPK2O43353 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.09■□□□□ 0.01
RIPK2O43353 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.09■□□□□ 0.01
RIPK2O43353 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.09■□□□□ 0.01
RIPK2O43353 AC004241.5-201ENST00000623870 2448 ntBASIC15.09■□□□□ 0.01
RIPK2O43353 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
RIPK2O43353 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.09■□□□□ 0.01
RIPK2O43353 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RIPK2O43353 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.09■□□□□ 0.01
RIPK2O43353 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC15.09■□□□□ 0.01
RIPK2O43353 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC15.09■□□□□ 0.01
RIPK2O43353 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RIPK2O43353 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.09■□□□□ 0.01
RIPK2O43353 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.09■□□□□ 0.01
RIPK2O43353 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RIPK2O43353 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms