Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AL157813.1-201ENST00000612996 587 ntBASIC16.92■□□□□ 0.3
ATP2A1O14983 AC013726.1-201ENST00000563747 2285 ntBASIC16.92■□□□□ 0.3
ATP2A1O14983 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A1O14983 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ATP2A1O14983 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A1O14983 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ATP2A1O14983 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A1O14983 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A1O14983 MRPL37P1-201ENST00000592451 1337 ntBASIC16.92■□□□□ 0.3
ATP2A1O14983 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.92■□□□□ 0.3
ATP2A1O14983 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP2A1O14983 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A1O14983 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A1O14983 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ATP2A1O14983 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A1O14983 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ATP2A1O14983 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ATP2A1O14983 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A1O14983 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 OR2I1P-209ENST00000641730 5365 ntBASIC16.91■□□□□ 0.3
ATP2A1O14983 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP2A1O14983 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP2A1O14983 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATP2A1O14983 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ATP2A1O14983 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP2A1O14983 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ATP2A1O14983 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP2A1O14983 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
ATP2A1O14983 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP2A1O14983 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP2A1O14983 XBP1P1-201ENST00000436573 652 ntBASIC16.91■□□□□ 0.3
ATP2A1O14983 FTLP1-201ENST00000449155 526 ntBASIC16.91■□□□□ 0.3
ATP2A1O14983 AC073150.1-201ENST00000450406 1084 ntBASIC16.91■□□□□ 0.3
ATP2A1O14983 CEP164P1-201ENST00000455142 418 ntBASIC16.91■□□□□ 0.3
ATP2A1O14983 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP2A1O14983 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP2A1O14983 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 MIR4706-201ENST00000582134 82 ntBASIC16.91■□□□□ 0.3
ATP2A1O14983 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP2A1O14983 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
ATP2A1O14983 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
ATP2A1O14983 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP2A1O14983 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP2A1O14983 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP2A1O14983 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP2A1O14983 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP2A1O14983 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP2A1O14983 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A1O14983 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
ATP2A1O14983 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
ATP2A1O14983 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ATP2A1O14983 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP2A1O14983 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP2A1O14983 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ATP2A1O14983 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2A1O14983 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.9■□□□□ 0.3
ATP2A1O14983 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP2A1O14983 RN7SL258P-201ENST00000478664 300 ntBASIC16.9■□□□□ 0.3
ATP2A1O14983 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2A1O14983 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP2A1O14983 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2A1O14983 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
ATP2A1O14983 RBM8B-201ENST00000555532 525 ntBASIC16.9■□□□□ 0.3
ATP2A1O14983 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.9■□□□□ 0.3
ATP2A1O14983 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP2A1O14983 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP2A1O14983 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms