Protein–RNA interactions for Protein: O00559

EBAG9, Receptor-binding cancer antigen expressed on SiSo cells, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBAG9O00559 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBAG9O00559 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBAG9O00559 AC012531.1-201ENST00000562848 2680 ntBASIC14.86□□□□□ -0.03
EBAG9O00559 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
EBAG9O00559 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
EBAG9O00559 AC110048.1-201ENST00000604293 2157 ntBASIC14.86□□□□□ -0.03
EBAG9O00559 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
EBAG9O00559 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.86□□□□□ -0.03
EBAG9O00559 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBAG9O00559 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBAG9O00559 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.86□□□□□ -0.03
EBAG9O00559 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EBAG9O00559 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EBAG9O00559 CXCL1P1-201ENST00000502804 216 ntBASIC14.86□□□□□ -0.03
EBAG9O00559 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.86□□□□□ -0.03
EBAG9O00559 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.86□□□□□ -0.03
EBAG9O00559 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.86□□□□□ -0.03
EBAG9O00559 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.86□□□□□ -0.03
EBAG9O00559 MTDHP3-201ENST00000594186 672 ntBASIC14.86□□□□□ -0.03
EBAG9O00559 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
EBAG9O00559 AC099336.1-202ENST00000602961 463 ntBASIC14.86□□□□□ -0.03
EBAG9O00559 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.86□□□□□ -0.03
EBAG9O00559 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
EBAG9O00559 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBAG9O00559 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBAG9O00559 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBAG9O00559 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBAG9O00559 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
EBAG9O00559 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
EBAG9O00559 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBAG9O00559 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBAG9O00559 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.86□□□□□ -0.03
EBAG9O00559 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
EBAG9O00559 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC14.86□□□□□ -0.03
EBAG9O00559 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
EBAG9O00559 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC14.86□□□□□ -0.03
EBAG9O00559 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
EBAG9O00559 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EBAG9O00559 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
EBAG9O00559 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC14.86□□□□□ -0.03
EBAG9O00559 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
EBAG9O00559 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
EBAG9O00559 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
EBAG9O00559 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
EBAG9O00559 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.85□□□□□ -0.03
EBAG9O00559 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
EBAG9O00559 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
EBAG9O00559 TERF1P1-201ENST00000311003 1181 ntBASIC14.85□□□□□ -0.03
EBAG9O00559 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.85□□□□□ -0.03
EBAG9O00559 AC113347.1-201ENST00000413321 391 ntBASIC14.85□□□□□ -0.03
EBAG9O00559 LAGE3P1-201ENST00000425356 484 ntBASIC14.85□□□□□ -0.03
EBAG9O00559 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.85□□□□□ -0.03
EBAG9O00559 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.85□□□□□ -0.03
EBAG9O00559 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.85□□□□□ -0.03
EBAG9O00559 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.85□□□□□ -0.03
EBAG9O00559 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.85□□□□□ -0.03
EBAG9O00559 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.85□□□□□ -0.03
EBAG9O00559 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.85□□□□□ -0.03
EBAG9O00559 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
EBAG9O00559 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
EBAG9O00559 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.85□□□□□ -0.03
EBAG9O00559 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.85□□□□□ -0.03
EBAG9O00559 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
EBAG9O00559 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
EBAG9O00559 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBAG9O00559 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.85□□□□□ -0.03
EBAG9O00559 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC14.85□□□□□ -0.03
EBAG9O00559 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
EBAG9O00559 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EBAG9O00559 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EBAG9O00559 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBAG9O00559 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
EBAG9O00559 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBAG9O00559 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBAG9O00559 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EBAG9O00559 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.84□□□□□ -0.03
EBAG9O00559 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.84□□□□□ -0.03
EBAG9O00559 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBAG9O00559 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC14.84□□□□□ -0.03
EBAG9O00559 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBAG9O00559 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC14.84□□□□□ -0.03
EBAG9O00559 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms