Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 CLUHP2-201ENST00000426660 1303 ntBASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 AL136379.1-201ENST00000623471 2642 ntBASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 MIR663B-201ENST00000408361 115 ntBASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 HSPB1P2-201ENST00000448722 546 ntBASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 AC004898.1-201ENST00000451057 766 ntBASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 AC106820.3-201ENST00000561653 397 ntBASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 AC138466.3-201ENST00000619983 221 ntBASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 ACE3P-201ENST00000423435 1973 ntBASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA2E9PIF3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 POM121L10P-201ENST00000436994 1285 ntBASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 AC026434.2-201ENST00000506094 1078 ntBASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 DUX4L47-201ENST00000566374 394 ntBASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms