Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 AP001267.2-201ENST00000532619 2086 ntBASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 KRT8P35-201ENST00000483942 1338 ntBASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 TLE1P1-201ENST00000422965 589 ntBASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 AC093433.1-201ENST00000458048 571 ntBASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 AC060766.1-201ENST00000590824 627 ntBASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 SBF1P1-201ENST00000444527 5631 ntBASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 MBLAC2-202ENST00000514906 1936 ntBASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 AC092135.3-201ENST00000624151 1846 ntBASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA11Q9Y5H2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 WASH4P-201ENST00000564273 1246 ntBASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms