Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 POM121L10P-201ENST00000436994 1285 ntBASIC14.86□□□□□ -0.03
SPASTQ9UBP0 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SPASTQ9UBP0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 MIR663B-201ENST00000408361 115 ntBASIC14.85□□□□□ -0.03
SPASTQ9UBP0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 HSPB1P2-201ENST00000448722 546 ntBASIC14.85□□□□□ -0.03
SPASTQ9UBP0 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.85□□□□□ -0.03
SPASTQ9UBP0 FTLP10-202ENST00000505798 471 ntBASIC14.85□□□□□ -0.03
SPASTQ9UBP0 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 CICP24-201ENST00000605464 2705 ntBASIC14.85□□□□□ -0.03
SPASTQ9UBP0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SPASTQ9UBP0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms