Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 GCSHP3-201ENST00000431120 391 ntBASIC14.69□□□□□ -0.06
NCDNQ9UBB6 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 AL354861.1-201ENST00000445213 355 ntBASIC14.69□□□□□ -0.06
NCDNQ9UBB6 AC026434.2-201ENST00000506094 1078 ntBASIC14.69□□□□□ -0.06
NCDNQ9UBB6 TMCO5B-205ENST00000530020 894 ntBASIC14.69□□□□□ -0.06
NCDNQ9UBB6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 MME-218ENST00000625667 363 ntTSL 5 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 FAM90A21P-201ENST00000510875 1396 ntBASIC14.69□□□□□ -0.06
NCDNQ9UBB6 FAM90A15P-201ENST00000514465 1395 ntBASIC14.69□□□□□ -0.06
NCDNQ9UBB6 FAM90A6P-201ENST00000515148 1394 ntBASIC14.69□□□□□ -0.06
NCDNQ9UBB6 FAM90A16P-201ENST00000526662 1395 ntBASIC14.69□□□□□ -0.06
NCDNQ9UBB6 FAM90A9P-201ENST00000527940 1395 ntBASIC14.69□□□□□ -0.06
NCDNQ9UBB6 FAM90A5P-201ENST00000528738 1395 ntBASIC14.69□□□□□ -0.06
NCDNQ9UBB6 FAM90A14P-201ENST00000530386 1395 ntBASIC14.69□□□□□ -0.06
NCDNQ9UBB6 FAM90A13P-201ENST00000534703 1395 ntBASIC14.69□□□□□ -0.06
NCDNQ9UBB6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 AP005117.1-202ENST00000581724 1908 ntBASIC14.68□□□□□ -0.06
NCDNQ9UBB6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 MIR557-201ENST00000385239 98 ntBASIC14.68□□□□□ -0.06
NCDNQ9UBB6 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 NDUFS6P1-201ENST00000485187 316 ntBASIC14.68□□□□□ -0.06
NCDNQ9UBB6 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 CR383656.3-201ENST00000551315 183 ntBASIC14.68□□□□□ -0.06
NCDNQ9UBB6 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 AC008825.2-201ENST00000603374 718 ntBASIC14.68□□□□□ -0.06
NCDNQ9UBB6 MIR6720-201ENST00000611664 98 ntBASIC14.68□□□□□ -0.06
NCDNQ9UBB6 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 AC025262.2-201ENST00000623975 1056 ntBASIC14.68□□□□□ -0.06
NCDNQ9UBB6 PLS3-210ENST00000626746 216 ntTSL 4 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 AC009093.2-202ENST00000620513 2079 ntBASIC14.68□□□□□ -0.06
NCDNQ9UBB6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 AC006058.4-201ENST00000624016 1670 ntBASIC14.68□□□□□ -0.06
NCDNQ9UBB6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NCDNQ9UBB6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCDNQ9UBB6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
NCDNQ9UBB6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCDNQ9UBB6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCDNQ9UBB6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCDNQ9UBB6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms