Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.67□□□□□ -0.06
MKS1Q9NXB0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.67□□□□□ -0.06
MKS1Q9NXB0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 ACTBP8-201ENST00000403258 1108 ntBASIC14.66□□□□□ -0.06
MKS1Q9NXB0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 AL390955.2-201ENST00000603032 514 ntBASIC14.66□□□□□ -0.06
MKS1Q9NXB0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 AC134684.3-201ENST00000641758 218 ntBASIC14.66□□□□□ -0.06
MKS1Q9NXB0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 DGCR9-201ENST00000609630 2415 ntBASIC14.66□□□□□ -0.06
MKS1Q9NXB0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MKS1Q9NXB0 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.65□□□□□ -0.06
MKS1Q9NXB0 AC020658.7-201ENST00000624274 2442 ntBASIC14.65□□□□□ -0.06
MKS1Q9NXB0 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 AC023310.3-201ENST00000557027 670 ntBASIC14.65□□□□□ -0.06
MKS1Q9NXB0 AC100756.1-201ENST00000562736 682 ntBASIC14.65□□□□□ -0.06
MKS1Q9NXB0 AC138749.3-201ENST00000567691 622 ntBASIC14.65□□□□□ -0.06
MKS1Q9NXB0 AC124283.3-201ENST00000570869 594 ntBASIC14.65□□□□□ -0.06
MKS1Q9NXB0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 AC116165.1-201ENST00000611806 668 ntBASIC14.65□□□□□ -0.06
MKS1Q9NXB0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 AGAP10P-201ENST00000454844 2418 ntBASIC14.65□□□□□ -0.06
MKS1Q9NXB0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MKS1Q9NXB0 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms