Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 PPP1R26P4-201ENST00000619065 3527 ntBASIC17.32■□□□□ 0.36
EFCC1Q9HA90 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 SERF2-206ENST00000409291 807 ntTSL 3 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.32■□□□□ 0.36
EFCC1Q9HA90 POU5F1P2-201ENST00000521750 823 ntBASIC17.32■□□□□ 0.36
EFCC1Q9HA90 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 AL132994.2-201ENST00000603120 687 ntBASIC17.32■□□□□ 0.36
EFCC1Q9HA90 AL136301.1-201ENST00000615830 422 ntBASIC17.32■□□□□ 0.36
EFCC1Q9HA90 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 MIR4649-201ENST00000582839 64 ntBASIC17.31■□□□□ 0.36
EFCC1Q9HA90 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 AL358472.3-201ENST00000608147 415 ntBASIC17.31■□□□□ 0.36
EFCC1Q9HA90 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 AC242376.2-201ENST00000619355 883 ntBASIC17.31■□□□□ 0.36
EFCC1Q9HA90 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EFCC1Q9HA90 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 AP000356.3-201ENST00000382243 753 ntBASIC17.3■□□□□ 0.36
EFCC1Q9HA90 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms