Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 AC011840.2-201ENST00000563063 1520 ntBASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 AL450487.1-201ENST00000426799 995 ntBASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 AC140658.5-201ENST00000438532 169 ntBASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 AF238378.1-201ENST00000526806 358 ntBASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 AL356488.2-201ENST00000602755 427 ntBASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 AL161645.1-201ENST00000622716 1255 ntBASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 CLK3P2-201ENST00000427566 1453 ntBASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 AC073957.3-201ENST00000609998 6758 ntBASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 POM121L14P-201ENST00000406100 1558 ntBASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 DLX4-206ENST00000611342 1662 ntBASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RAB3IPQ96QF0 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 AGAP10P-201ENST00000454844 2418 ntBASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 PRSS29P-201ENST00000440800 595 ntBASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms