Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNGAP1Q96PV0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.83■□□□□ 0.28
SYNGAP1Q96PV0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNGAP1Q96PV0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SYNGAP1Q96PV0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNGAP1Q96PV0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNGAP1Q96PV0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNGAP1Q96PV0 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNGAP1Q96PV0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.83■□□□□ 0.28
SYNGAP1Q96PV0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNGAP1Q96PV0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 AC114501.1-201ENST00000445949 172 ntBASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 AC005962.1-201ENST00000584100 773 ntBASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 AC023090.2-201ENST00000625182 2110 ntBASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNGAP1Q96PV0 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 AC068418.2-201ENST00000577309 3703 ntBASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 AC073150.1-201ENST00000450406 1084 ntBASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 AC008267.1-201ENST00000474858 1069 ntBASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNGAP1Q96PV0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNGAP1Q96PV0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNGAP1Q96PV0 AC239868.1-201ENST00000369385 493 ntBASIC16.8■□□□□ 0.28
SYNGAP1Q96PV0 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.8■□□□□ 0.28
SYNGAP1Q96PV0 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.8■□□□□ 0.28
SYNGAP1Q96PV0 AC026316.1-201ENST00000398900 414 ntBASIC16.8■□□□□ 0.28
SYNGAP1Q96PV0 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYNGAP1Q96PV0 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SYNGAP1Q96PV0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SYNGAP1Q96PV0 AC069218.1-201ENST00000435269 762 ntBASIC16.8■□□□□ 0.28
SYNGAP1Q96PV0 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.8■□□□□ 0.28
SYNGAP1Q96PV0 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.8■□□□□ 0.28
SYNGAP1Q96PV0 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.8■□□□□ 0.28
SYNGAP1Q96PV0 POU5F1P2-201ENST00000521750 823 ntBASIC16.8■□□□□ 0.28
SYNGAP1Q96PV0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.8■□□□□ 0.28
SYNGAP1Q96PV0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms