Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 Z93015.1-201ENST00000451718 390 ntBASIC13.2□□□□□ -0.3
APH1AQ96BI3 AP003171.2-201ENST00000528208 925 ntBASIC13.2□□□□□ -0.3
APH1AQ96BI3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 EEF1DP1-201ENST00000585891 896 ntBASIC13.2□□□□□ -0.3
APH1AQ96BI3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 AC002472.3-201ENST00000640124 621 ntBASIC13.2□□□□□ -0.3
APH1AQ96BI3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 INE2-201ENST00000630399 1874 ntBASIC13.2□□□□□ -0.3
APH1AQ96BI3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1AQ96BI3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1AQ96BI3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 CICP23-201ENST00000605013 2741 ntBASIC13.19□□□□□ -0.3
APH1AQ96BI3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 TUBB1P2-201ENST00000422712 1306 ntBASIC13.19□□□□□ -0.3
APH1AQ96BI3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 TUBB1P1-201ENST00000503144 1300 ntBASIC13.19□□□□□ -0.3
APH1AQ96BI3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 AC079178.1-201ENST00000420915 656 ntBASIC13.19□□□□□ -0.3
APH1AQ96BI3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 AL583810.1-201ENST00000553344 1045 ntBASIC13.19□□□□□ -0.3
APH1AQ96BI3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 RN7SL560P-201ENST00000577943 264 ntBASIC13.19□□□□□ -0.3
APH1AQ96BI3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 AC018442.1-201ENST00000421439 2061 ntBASIC13.19□□□□□ -0.3
APH1AQ96BI3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.19□□□□□ -0.3
APH1AQ96BI3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms