Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 CALR4P-201ENST00000431943 946 ntBASIC14.11□□□□□ -0.15
TM9SF4Q92544 AC007969.1-201ENST00000433675 447 ntBASIC14.11□□□□□ -0.15
TM9SF4Q92544 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 C2orf69P2-201ENST00000562032 1123 ntBASIC14.11□□□□□ -0.15
TM9SF4Q92544 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 AC020914.3-201ENST00000594712 304 ntBASIC14.11□□□□□ -0.15
TM9SF4Q92544 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 AC025181.2-201ENST00000606994 802 ntBASIC14.11□□□□□ -0.15
TM9SF4Q92544 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 CICP14-201ENST00000629111 2732 ntBASIC14.1□□□□□ -0.15
TM9SF4Q92544 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 RNU1-114P-201ENST00000365297 166 ntBASIC14.1□□□□□ -0.15
TM9SF4Q92544 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 SLC25A24P2-201ENST00000415059 510 ntBASIC14.1□□□□□ -0.15
TM9SF4Q92544 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 AL591846.1-201ENST00000451736 433 ntBASIC14.1□□□□□ -0.15
TM9SF4Q92544 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 AC091804.1-201ENST00000486888 567 ntBASIC14.1□□□□□ -0.15
TM9SF4Q92544 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 AC041040.2-201ENST00000622926 2899 ntBASIC14.1□□□□□ -0.15
TM9SF4Q92544 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms