Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 RN7SL22P-201ENST00000471800 269 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AC136475.6-201ENST00000533113 289 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AC025682.1-204ENST00000580045 733 ntTSL 5 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AL356423.1-201ENST00000604953 538 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 Metazoa_SRP.85-201ENST00000610909 260 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 RHBDF1P1-201ENST00000427504 1941 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 DTNBP1-204ENST00000462989 1010 ntTSL 3 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 LINC02074-201ENST00000581028 569 ntTSL 4 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 MIR4265-201ENST00000582152 99 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 LINC02074-202ENST00000584003 573 ntTSL 4 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 MYO5BP1-201ENST00000610994 1239 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AC064801.2-201ENST00000625052 1303 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 SUCLG2P2-201ENST00000307241 1296 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 TUSC8-201ENST00000432701 978 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AC245100.5-201ENST00000452108 331 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 RN7SL292P-201ENST00000473305 266 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AC089987.1-202ENST00000641959 426 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 TFAM-201ENST00000373895 973 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AQP7P1-201ENST00000412626 1045 ntBASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 HLA-K-203ENST00000430151 1046 ntBASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 B2M-202ENST00000544417 933 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AC022392.1-201ENST00000609403 744 ntBASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AL160408.6-201ENST00000632063 1257 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AP001282.1-201ENST00000531301 1499 ntBASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 WFDC2-201ENST00000217425 356 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AP000692.1-201ENST00000397184 596 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 RAB42P1-201ENST00000555078 316 ntBASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AC137932.2-201ENST00000562995 1205 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 ODCP-201ENST00000459650 1639 ntBASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms