Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 AC140479.7-201ENST00000636301 2332 ntBASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 BEND3P1-201ENST00000421591 1944 ntBASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 RPL5P21-201ENST00000404620 815 ntBASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 AC244093.1-201ENST00000610837 814 ntBASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 ENPP7P14-201ENST00000621765 1040 ntBASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDND2Q8NHS1 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.71□□□□□ -0.38
CLDND2Q8NHS1 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CLDND2Q8NHS1 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.71□□□□□ -0.38
CLDND2Q8NHS1 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDND2Q8NHS1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.71□□□□□ -0.38
CLDND2Q8NHS1 AL133338.1-201ENST00000565695 1517 ntBASIC12.71□□□□□ -0.38
CLDND2Q8NHS1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.71□□□□□ -0.38
CLDND2Q8NHS1 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.71□□□□□ -0.38
CLDND2Q8NHS1 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CLDND2Q8NHS1 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDND2Q8NHS1 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CLDND2Q8NHS1 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.71□□□□□ -0.38
CLDND2Q8NHS1 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDND2Q8NHS1 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CLDND2Q8NHS1 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDND2Q8NHS1 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
CLDND2Q8NHS1 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 AC097376.2-205ENST00000610159 5334 ntBASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 BTBD6P1-201ENST00000412176 1267 ntBASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 GOLGA2P4-201ENST00000441462 777 ntBASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 AC126365.1-201ENST00000578585 1514 ntBASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLDND2Q8NHS1 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms