Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 ST20-AS1-201ENST00000560255 4223 ntBASIC13.94□□□□□ -0.18
NUP43Q8NFH3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 FTLP10-202ENST00000505798 471 ntBASIC13.93□□□□□ -0.18
NUP43Q8NFH3 SLC25A47P1-201ENST00000531577 414 ntBASIC13.93□□□□□ -0.18
NUP43Q8NFH3 AC131206.1-201ENST00000538078 1211 ntBASIC13.93□□□□□ -0.18
NUP43Q8NFH3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 AC015936.2-201ENST00000593177 259 ntBASIC13.93□□□□□ -0.18
NUP43Q8NFH3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 AC138466.3-201ENST00000619983 221 ntBASIC13.93□□□□□ -0.18
NUP43Q8NFH3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 AC011840.2-201ENST00000563063 1520 ntBASIC13.93□□□□□ -0.18
NUP43Q8NFH3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
NUP43Q8NFH3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 FKBP4P6-201ENST00000457486 1332 ntBASIC13.92□□□□□ -0.18
NUP43Q8NFH3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 TPM3P8-201ENST00000330554 643 ntBASIC13.92□□□□□ -0.18
NUP43Q8NFH3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 INE1-201ENST00000456273 945 ntBASIC13.92□□□□□ -0.18
NUP43Q8NFH3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 AL596325.1-201ENST00000563991 1082 ntBASIC13.92□□□□□ -0.18
NUP43Q8NFH3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 AC138696.2-201ENST00000607376 223 ntBASIC13.92□□□□□ -0.18
NUP43Q8NFH3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 AL358472.5-202ENST00000641448 1267 ntBASIC13.92□□□□□ -0.18
NUP43Q8NFH3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms