Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC4.65□□□□□ -1.66
SYNE1Q8NF91 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC4.65□□□□□ -1.66
SYNE1Q8NF91 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.66
SYNE1Q8NF91 AL451050.2-201ENST00000606967 682 ntBASIC4.65□□□□□ -1.66
SYNE1Q8NF91 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
SYNE1Q8NF91 RERG-209ENST00000546331 1383 ntTSL 2 BASIC4.65□□□□□ -1.66
SYNE1Q8NF91 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SYNE1Q8NF91 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC4.65□□□□□ -1.66
SYNE1Q8NF91 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC4.65□□□□□ -1.66
SYNE1Q8NF91 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SYNE1Q8NF91 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SYNE1Q8NF91 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
SYNE1Q8NF91 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SYNE1Q8NF91 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SYNE1Q8NF91 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SYNE1Q8NF91 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.66
SYNE1Q8NF91 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SYNE1Q8NF91 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 SP100-205ENST00000409824 1802 ntTSL 5 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 TK1-203ENST00000588734 1681 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 AC100850.1-201ENST00000506768 649 ntBASIC4.65□□□□□ -1.67
SYNE1Q8NF91 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 MSANTD4-201ENST00000301919 4087 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 AC022188.1-201ENST00000620960 1664 ntBASIC4.65□□□□□ -1.67
SYNE1Q8NF91 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 BIRC2-213ENST00000613397 4066 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 BANP-201ENST00000286122 2368 ntTSL 5 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 OARD1-212ENST00000482515 832 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 AC104982.3-201ENST00000581995 514 ntBASIC4.65□□□□□ -1.67
SYNE1Q8NF91 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 SLC9A7P1-202ENST00000556476 2239 ntBASIC4.65□□□□□ -1.67
SYNE1Q8NF91 ADAMTS7P1-201ENST00000613213 4793 ntBASIC4.65□□□□□ -1.67
SYNE1Q8NF91 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 MOV10-204ENST00000413052 3641 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 BRWD1P1-201ENST00000401091 371 ntBASIC4.65□□□□□ -1.67
SYNE1Q8NF91 GGCT-203ENST00000409144 836 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 CHMP4BP1-201ENST00000556017 588 ntBASIC4.65□□□□□ -1.67
SYNE1Q8NF91 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 GRN-214ENST00000589265 1632 ntTSL 5 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 SUN1-204ENST00000403868 978 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNE1Q8NF91 HNRNPA1P63-201ENST00000427917 963 ntBASIC4.65□□□□□ -1.67
SYNE1Q8NF91 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms