Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 MIR3619-201ENST00000579667 83 ntBASIC16.18■□□□□ 0.18
VPS52Q8N1B4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS52Q8N1B4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 SNX18-202ENST00000343017 3140 ntBASIC16.17■□□□□ 0.18
VPS52Q8N1B4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 AC015967.2-201ENST00000624092 234 ntBASIC16.17■□□□□ 0.18
VPS52Q8N1B4 AC006435.4-201ENST00000625037 234 ntBASIC16.17■□□□□ 0.18
VPS52Q8N1B4 AL356737.1-201ENST00000634391 234 ntBASIC16.17■□□□□ 0.18
VPS52Q8N1B4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 CLUHP2-201ENST00000426660 1303 ntBASIC16.17■□□□□ 0.18
VPS52Q8N1B4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
VPS52Q8N1B4 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 REXO1L5P-201ENST00000622260 2098 ntBASIC16.16■□□□□ 0.18
VPS52Q8N1B4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 MIR769-201ENST00000390225 118 ntBASIC16.16■□□□□ 0.18
VPS52Q8N1B4 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 AL354877.1-201ENST00000424412 413 ntBASIC16.16■□□□□ 0.18
VPS52Q8N1B4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 FTLP10-202ENST00000505798 471 ntBASIC16.16■□□□□ 0.18
VPS52Q8N1B4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 AC016629.1-201ENST00000596579 586 ntBASIC16.16■□□□□ 0.18
VPS52Q8N1B4 AC004466.1-201ENST00000599515 1080 ntBASIC16.16■□□□□ 0.18
VPS52Q8N1B4 AC138466.3-201ENST00000619983 221 ntBASIC16.16■□□□□ 0.18
VPS52Q8N1B4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms