Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 AC138696.2-201ENST00000607376 223 ntBASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 OR2I1P-210ENST00000642037 4691 ntBASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB11FIP4Q86YS3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 MIR658-201ENST00000385210 100 ntBASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 FAM8A4P-201ENST00000435433 1213 ntBASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 AC022210.1-201ENST00000449856 793 ntBASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 GPR53P-205ENST00000457298 1084 ntBASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB11FIP4Q86YS3 MIR600HG-201ENST00000449175 5984 ntBASIC17.46■□□□□ 0.38
RAB11FIP4Q86YS3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 AL136172.1-201ENST00000598590 1394 ntBASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 AC099336.1-201ENST00000417053 1171 ntBASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 ARSEP1-201ENST00000420443 635 ntBASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 FTLP10-202ENST00000505798 471 ntBASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 AC104989.1-201ENST00000519711 778 ntBASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 AC073413.1-201ENST00000603927 732 ntBASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 AL603764.1-201ENST00000636452 321 ntBASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB11FIP4Q86YS3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 KRT8P4-201ENST00000509735 1454 ntBASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB11FIP4Q86YS3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms