Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12□□□□□ -0.49
VPS13CQ709C8 AP000769.1-203ENST00000637245 208 ntBASIC12□□□□□ -0.49
VPS13CQ709C8 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12□□□□□ -0.49
VPS13CQ709C8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12□□□□□ -0.49
VPS13CQ709C8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13CQ709C8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13CQ709C8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12□□□□□ -0.49
VPS13CQ709C8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13CQ709C8 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC12□□□□□ -0.49
VPS13CQ709C8 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC12□□□□□ -0.49
VPS13CQ709C8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12□□□□□ -0.49
VPS13CQ709C8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13CQ709C8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12□□□□□ -0.49
VPS13CQ709C8 AC073347.1-201ENST00000421633 2643 ntBASIC12□□□□□ -0.49
VPS13CQ709C8 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC12□□□□□ -0.49
VPS13CQ709C8 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13CQ709C8 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC12□□□□□ -0.49
VPS13CQ709C8 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12□□□□□ -0.49
VPS13CQ709C8 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12□□□□□ -0.49
VPS13CQ709C8 MT2A-202ENST00000561491 581 ntTSL 2 BASIC12□□□□□ -0.49
VPS13CQ709C8 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC12□□□□□ -0.49
VPS13CQ709C8 AC010976.2-201ENST00000609697 852 ntBASIC12□□□□□ -0.49
VPS13CQ709C8 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12□□□□□ -0.49
VPS13CQ709C8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13CQ709C8 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13CQ709C8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13CQ709C8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 MROH4P-201ENST00000431302 1578 ntBASIC11.99□□□□□ -0.49
VPS13CQ709C8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 HLA-DPA2-205ENST00000433582 733 ntBASIC11.99□□□□□ -0.49
VPS13CQ709C8 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 ST13P19-201ENST00000442505 1124 ntBASIC11.99□□□□□ -0.49
VPS13CQ709C8 AC053503.3-201ENST00000448375 114 ntBASIC11.99□□□□□ -0.49
VPS13CQ709C8 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 AC092135.3-201ENST00000624151 1846 ntBASIC11.99□□□□□ -0.49
VPS13CQ709C8 AC012617.1-204ENST00000586340 2305 ntBASIC11.99□□□□□ -0.49
VPS13CQ709C8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 MTHFR-210ENST00000641407 2387 ntBASIC11.99□□□□□ -0.49
VPS13CQ709C8 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 RN7SL530P-201ENST00000485097 298 ntBASIC11.99□□□□□ -0.49
VPS13CQ709C8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 PMEL-214ENST00000550447 901 ntTSL 3 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 AP000322.3-201ENST00000608665 388 ntBASIC11.99□□□□□ -0.49
VPS13CQ709C8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.99□□□□□ -0.49
VPS13CQ709C8 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13CQ709C8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 AC092612.1-201ENST00000514501 998 ntBASIC11.98□□□□□ -0.49
VPS13CQ709C8 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 BX322534.1-201ENST00000635574 241 ntBASIC11.98□□□□□ -0.49
VPS13CQ709C8 AC215524.1-201ENST00000635696 241 ntBASIC11.98□□□□□ -0.49
VPS13CQ709C8 HLA-DQB2-231ENST00000435145 2026 ntBASIC11.98□□□□□ -0.49
VPS13CQ709C8 FUCA1P1-201ENST00000374476 1351 ntBASIC11.98□□□□□ -0.49
VPS13CQ709C8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 PRORSD1P-202ENST00000563365 2154 ntBASIC11.98□□□□□ -0.49
VPS13CQ709C8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms