Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 FAM58BP-201ENST00000439056 645 ntBASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 BNIP3P13-201ENST00000599968 566 ntBASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 AL451050.2-201ENST00000606967 682 ntBASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 AL162426.1-201ENST00000624141 743 ntBASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
H3F3CQ6NXT2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 DPM3-202ENST00000368399 517 ntBASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 FNTAP2-201ENST00000430308 634 ntBASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 NKAIN1P1-201ENST00000435754 582 ntBASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms