Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 AL627422.1-201ENST00000434104 580 ntBASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 RPL13AP19-201ENST00000434320 584 ntBASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 FTH1P22-201ENST00000456305 520 ntBASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 CHCHD2P9-201ENST00000461726 456 ntBASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 CTBP2P4-201ENST00000513884 920 ntBASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 AL022334.2-201ENST00000610000 484 ntBASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 AC084781.1-201ENST00000613737 656 ntBASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 AC025262.2-201ENST00000623975 1056 ntBASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM71Q2Q1W2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 AC068418.2-201ENST00000577309 3703 ntBASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 RPL18AP3-201ENST00000462885 528 ntBASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 AC114947.1-202ENST00000514136 344 ntBASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 AC092135.3-201ENST00000624151 1846 ntBASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRIM71Q2Q1W2 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 ACE3P-201ENST00000423435 1973 ntBASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 AC139712.1-201ENST00000378256 1875 ntBASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 MRPL22P1-201ENST00000505398 616 ntBASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 TMCO5B-205ENST00000530020 894 ntBASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM71Q2Q1W2 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms