Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 NCLP1-201ENST00000445357 1963 ntBASIC13.25□□□□□ -0.29
EFNB1P98172 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
EFNB1P98172 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.25□□□□□ -0.29
EFNB1P98172 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
EFNB1P98172 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.25□□□□□ -0.29
EFNB1P98172 OR2I1P-210ENST00000642037 4691 ntBASIC13.25□□□□□ -0.29
EFNB1P98172 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.25□□□□□ -0.29
EFNB1P98172 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.25□□□□□ -0.29
EFNB1P98172 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
EFNB1P98172 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.25□□□□□ -0.29
EFNB1P98172 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.25□□□□□ -0.29
EFNB1P98172 ACTBP8-201ENST00000403258 1108 ntBASIC13.25□□□□□ -0.29
EFNB1P98172 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.25□□□□□ -0.29
EFNB1P98172 AC004967.1-201ENST00000453589 447 ntBASIC13.25□□□□□ -0.29
EFNB1P98172 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.25□□□□□ -0.29
EFNB1P98172 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
EFNB1P98172 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.25□□□□□ -0.29
EFNB1P98172 AC138696.2-201ENST00000607376 223 ntBASIC13.25□□□□□ -0.29
EFNB1P98172 AP005019.2-201ENST00000615104 511 ntBASIC13.25□□□□□ -0.29
EFNB1P98172 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.25□□□□□ -0.29
EFNB1P98172 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.25□□□□□ -0.29
EFNB1P98172 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
EFNB1P98172 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
EFNB1P98172 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
EFNB1P98172 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
EFNB1P98172 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNB1P98172 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
EFNB1P98172 AC022144.1-201ENST00000602255 1580 ntBASIC13.24□□□□□ -0.29
EFNB1P98172 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.24□□□□□ -0.29
EFNB1P98172 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
EFNB1P98172 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
EFNB1P98172 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.24□□□□□ -0.29
EFNB1P98172 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
EFNB1P98172 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
EFNB1P98172 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNB1P98172 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
EFNB1P98172 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNB1P98172 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNB1P98172 FO681548.1-201ENST00000455617 1132 ntBASIC13.24□□□□□ -0.29
EFNB1P98172 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.24□□□□□ -0.29
EFNB1P98172 ALG3P1-201ENST00000508806 1114 ntBASIC13.24□□□□□ -0.29
EFNB1P98172 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.24□□□□□ -0.29
EFNB1P98172 AP001582.1-201ENST00000525856 295 ntBASIC13.24□□□□□ -0.29
EFNB1P98172 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.24□□□□□ -0.29
EFNB1P98172 TPRX2P-201ENST00000535362 881 ntBASIC13.24□□□□□ -0.29
EFNB1P98172 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNB1P98172 AC004449.1-201ENST00000564240 433 ntBASIC13.24□□□□□ -0.29
EFNB1P98172 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.24□□□□□ -0.29
EFNB1P98172 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.24□□□□□ -0.29
EFNB1P98172 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.24□□□□□ -0.29
EFNB1P98172 AL390955.2-201ENST00000603032 514 ntBASIC13.24□□□□□ -0.29
EFNB1P98172 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNB1P98172 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.24□□□□□ -0.29
EFNB1P98172 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNB1P98172 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
EFNB1P98172 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.24□□□□□ -0.29
EFNB1P98172 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms