Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-1P78426 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.2□□□□□ -0.3
NKX6-1P78426 AL662890.1-201ENST00000396818 632 ntBASIC13.2□□□□□ -0.3
NKX6-1P78426 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-1P78426 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.2□□□□□ -0.3
NKX6-1P78426 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 AC114812.1-204ENST00000449669 728 ntBASIC13.2□□□□□ -0.3
NKX6-1P78426 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-1P78426 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 KRT18P25-201ENST00000508931 1278 ntBASIC13.2□□□□□ -0.3
NKX6-1P78426 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.2□□□□□ -0.3
NKX6-1P78426 SCARNA20.5-201ENST00000516991 142 ntBASIC13.2□□□□□ -0.3
NKX6-1P78426 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-1P78426 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-1P78426 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-1P78426 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-1P78426 MIR4741-201ENST00000579822 90 ntBASIC13.2□□□□□ -0.3
NKX6-1P78426 AC020914.3-201ENST00000594712 304 ntBASIC13.2□□□□□ -0.3
NKX6-1P78426 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.2□□□□□ -0.3
NKX6-1P78426 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.2□□□□□ -0.3
NKX6-1P78426 AC138951.2-201ENST00000623455 1161 ntBASIC13.2□□□□□ -0.3
NKX6-1P78426 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.2□□□□□ -0.3
NKX6-1P78426 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.2□□□□□ -0.3
NKX6-1P78426 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NKX6-1P78426 AC138028.6-201ENST00000616106 1482 ntBASIC13.2□□□□□ -0.3
NKX6-1P78426 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NKX6-1P78426 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-1P78426 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NKX6-1P78426 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
NKX6-1P78426 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-1P78426 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-1P78426 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-1P78426 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
NKX6-1P78426 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
NKX6-1P78426 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-1P78426 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 SSR4P1-203ENST00000599569 2260 ntBASIC13.19□□□□□ -0.3
NKX6-1P78426 AC023157.3-201ENST00000619086 2088 ntBASIC13.19□□□□□ -0.3
NKX6-1P78426 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
NKX6-1P78426 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX6-1P78426 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.19□□□□□ -0.3
NKX6-1P78426 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NKX6-1P78426 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX6-1P78426 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
NKX6-1P78426 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX6-1P78426 AC006001.1-201ENST00000325130 474 ntBASIC13.19□□□□□ -0.3
NKX6-1P78426 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
NKX6-1P78426 RNU1-114P-201ENST00000365297 166 ntBASIC13.19□□□□□ -0.3
NKX6-1P78426 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.19□□□□□ -0.3
NKX6-1P78426 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NKX6-1P78426 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
NKX6-1P78426 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.19□□□□□ -0.3
NKX6-1P78426 KLF2P2-201ENST00000416807 1039 ntBASIC13.19□□□□□ -0.3
NKX6-1P78426 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX6-1P78426 FNTAP2-201ENST00000430308 634 ntBASIC13.19□□□□□ -0.3
NKX6-1P78426 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 AC005077.2-201ENST00000449786 690 ntBASIC13.19□□□□□ -0.3
NKX6-1P78426 AC004898.1-201ENST00000451057 766 ntBASIC13.19□□□□□ -0.3
NKX6-1P78426 AL591846.1-201ENST00000451736 433 ntBASIC13.19□□□□□ -0.3
NKX6-1P78426 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.19□□□□□ -0.3
NKX6-1P78426 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX6-1P78426 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.19□□□□□ -0.3
NKX6-1P78426 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-1P78426 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.19□□□□□ -0.3
NKX6-1P78426 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.19□□□□□ -0.3
NKX6-1P78426 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.19□□□□□ -0.3
NKX6-1P78426 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.19□□□□□ -0.3
NKX6-1P78426 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms