Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC145423.3-201ENST00000615987 467 ntBASIC15.32■□□□□ 0.04
ATXN3P54252 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.32■□□□□ 0.04
ATXN3P54252 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.32■□□□□ 0.04
ATXN3P54252 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ATXN3P54252 KRT8P35-201ENST00000483942 1338 ntBASIC15.32■□□□□ 0.04
ATXN3P54252 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.32■□□□□ 0.04
ATXN3P54252 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.32■□□□□ 0.04
ATXN3P54252 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ATXN3P54252 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
ATXN3P54252 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.32■□□□□ 0.04
ATXN3P54252 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.32■□□□□ 0.04
ATXN3P54252 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.32■□□□□ 0.04
ATXN3P54252 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.32■□□□□ 0.04
ATXN3P54252 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
ATXN3P54252 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATXN3P54252 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.31■□□□□ 0.04
ATXN3P54252 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.31■□□□□ 0.04
ATXN3P54252 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.31■□□□□ 0.04
ATXN3P54252 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
ATXN3P54252 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATXN3P54252 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ATXN3P54252 AC134407.2-201ENST00000625089 1978 ntBASIC15.31■□□□□ 0.04
ATXN3P54252 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATXN3P54252 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATXN3P54252 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATXN3P54252 AC232323.1-201ENST00000540724 2099 ntBASIC15.31■□□□□ 0.04
ATXN3P54252 REXO1L5P-201ENST00000622260 2098 ntBASIC15.31■□□□□ 0.04
ATXN3P54252 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ATXN3P54252 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATXN3P54252 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ATXN3P54252 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ATXN3P54252 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATXN3P54252 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATXN3P54252 AC005912.2-201ENST00000619492 2400 ntBASIC15.31■□□□□ 0.04
ATXN3P54252 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.31■□□□□ 0.04
ATXN3P54252 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATXN3P54252 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.31■□□□□ 0.04
ATXN3P54252 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.31■□□□□ 0.04
ATXN3P54252 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.31■□□□□ 0.04
ATXN3P54252 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.31■□□□□ 0.04
ATXN3P54252 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.31■□□□□ 0.04
ATXN3P54252 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.31■□□□□ 0.04
ATXN3P54252 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.31■□□□□ 0.04
ATXN3P54252 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.31■□□□□ 0.04
ATXN3P54252 RNA5SP486-201ENST00000515961 83 ntBASIC15.31■□□□□ 0.04
ATXN3P54252 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.31■□□□□ 0.04
ATXN3P54252 AP006547.1-201ENST00000563435 692 ntBASIC15.31■□□□□ 0.04
ATXN3P54252 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ATXN3P54252 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ATXN3P54252 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.31■□□□□ 0.04
ATXN3P54252 EEF1DP1-201ENST00000585891 896 ntBASIC15.31■□□□□ 0.04
ATXN3P54252 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.31■□□□□ 0.04
ATXN3P54252 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.31■□□□□ 0.04
ATXN3P54252 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.31■□□□□ 0.04
ATXN3P54252 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATXN3P54252 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATXN3P54252 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ATXN3P54252 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATXN3P54252 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATXN3P54252 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ATXN3P54252 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.31■□□□□ 0.04
ATXN3P54252 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.31■□□□□ 0.04
ATXN3P54252 AC015818.8-201ENST00000587907 1519 ntBASIC15.31■□□□□ 0.04
ATXN3P54252 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATXN3P54252 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATXN3P54252 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
ATXN3P54252 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATXN3P54252 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.31■□□□□ 0.04
ATXN3P54252 LINC01101-201ENST00000622953 1884 ntBASIC15.31■□□□□ 0.04
ATXN3P54252 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ATXN3P54252 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
ATXN3P54252 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.31■□□□□ 0.04
ATXN3P54252 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATXN3P54252 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATXN3P54252 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ATXN3P54252 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATXN3P54252 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATXN3P54252 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATXN3P54252 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATXN3P54252 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATXN3P54252 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATXN3P54252 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.3■□□□□ 0.04
ATXN3P54252 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
ATXN3P54252 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.3■□□□□ 0.04
ATXN3P54252 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.3■□□□□ 0.04
ATXN3P54252 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.3■□□□□ 0.04
ATXN3P54252 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATXN3P54252 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.3■□□□□ 0.04
ATXN3P54252 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATXN3P54252 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms