Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RFC3P40938 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.67□□□□□ -0.22
RFC3P40938 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.67□□□□□ -0.22
RFC3P40938 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
RFC3P40938 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RFC3P40938 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RFC3P40938 AC079781.5-202ENST00000641784 3743 ntBASIC13.67□□□□□ -0.22
RFC3P40938 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.67□□□□□ -0.22
RFC3P40938 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.67□□□□□ -0.22
RFC3P40938 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.67□□□□□ -0.22
RFC3P40938 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.67□□□□□ -0.22
RFC3P40938 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.67□□□□□ -0.22
RFC3P40938 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.67□□□□□ -0.22
RFC3P40938 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.67□□□□□ -0.22
RFC3P40938 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.67□□□□□ -0.22
RFC3P40938 AC244157.2-201ENST00000616239 1006 ntBASIC13.67□□□□□ -0.22
RFC3P40938 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
RFC3P40938 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RFC3P40938 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RFC3P40938 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RFC3P40938 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
RFC3P40938 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RFC3P40938 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RFC3P40938 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.67□□□□□ -0.22
RFC3P40938 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RFC3P40938 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
RFC3P40938 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RFC3P40938 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFC3P40938 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RFC3P40938 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.66□□□□□ -0.22
RFC3P40938 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RFC3P40938 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 AC091951.1-201ENST00000512854 2465 ntBASIC13.66□□□□□ -0.22
RFC3P40938 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RFC3P40938 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RFC3P40938 AC011840.2-201ENST00000563063 1520 ntBASIC13.66□□□□□ -0.22
RFC3P40938 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RFC3P40938 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RFC3P40938 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 MIR663B-201ENST00000408361 115 ntBASIC13.66□□□□□ -0.22
RFC3P40938 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.66□□□□□ -0.22
RFC3P40938 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.66□□□□□ -0.22
RFC3P40938 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.66□□□□□ -0.22
RFC3P40938 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.66□□□□□ -0.22
RFC3P40938 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.66□□□□□ -0.22
RFC3P40938 MESTP3-201ENST00000503460 968 ntBASIC13.66□□□□□ -0.22
RFC3P40938 AC100850.1-201ENST00000506768 649 ntBASIC13.66□□□□□ -0.22
RFC3P40938 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.66□□□□□ -0.22
RFC3P40938 AL451050.2-201ENST00000606967 682 ntBASIC13.66□□□□□ -0.22
RFC3P40938 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.66□□□□□ -0.22
RFC3P40938 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.66□□□□□ -0.22
RFC3P40938 AL603764.1-201ENST00000636452 321 ntBASIC13.66□□□□□ -0.22
RFC3P40938 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 TMBIM7P-203ENST00000641617 1718 ntBASIC13.66□□□□□ -0.22
RFC3P40938 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFC3P40938 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms