Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.2□□□□□ -0.46
CEACAM3P40198 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CEACAM3P40198 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CEACAM3P40198 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CEACAM3P40198 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CEACAM3P40198 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CEACAM3P40198 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.2□□□□□ -0.46
CEACAM3P40198 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CEACAM3P40198 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CEACAM3P40198 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CEACAM3P40198 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CEACAM3P40198 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
CEACAM3P40198 AC079781.5-202ENST00000641784 3743 ntBASIC12.2□□□□□ -0.46
CEACAM3P40198 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CEACAM3P40198 AC013726.1-201ENST00000563747 2285 ntBASIC12.2□□□□□ -0.46
CEACAM3P40198 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.2□□□□□ -0.46
CEACAM3P40198 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.19□□□□□ -0.46
CEACAM3P40198 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CEACAM3P40198 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.19□□□□□ -0.46
CEACAM3P40198 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 TNRC18P2-201ENST00000417666 2714 ntBASIC12.19□□□□□ -0.46
CEACAM3P40198 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.19□□□□□ -0.46
CEACAM3P40198 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.19□□□□□ -0.46
CEACAM3P40198 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.19□□□□□ -0.46
CEACAM3P40198 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CEACAM3P40198 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.19□□□□□ -0.46
CEACAM3P40198 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CEACAM3P40198 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.19□□□□□ -0.46
CEACAM3P40198 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.19□□□□□ -0.46
CEACAM3P40198 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.19□□□□□ -0.46
CEACAM3P40198 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.19□□□□□ -0.46
CEACAM3P40198 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.19□□□□□ -0.46
CEACAM3P40198 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.19□□□□□ -0.46
CEACAM3P40198 KLF2P4-201ENST00000451959 1225 ntBASIC12.19□□□□□ -0.46
CEACAM3P40198 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CEACAM3P40198 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.19□□□□□ -0.46
CEACAM3P40198 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.19□□□□□ -0.46
CEACAM3P40198 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.19□□□□□ -0.46
CEACAM3P40198 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.19□□□□□ -0.46
CEACAM3P40198 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.19□□□□□ -0.46
CEACAM3P40198 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.19□□□□□ -0.46
CEACAM3P40198 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.19□□□□□ -0.46
CEACAM3P40198 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.19□□□□□ -0.46
CEACAM3P40198 AC239800.4-201ENST00000603712 296 ntBASIC12.19□□□□□ -0.46
CEACAM3P40198 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.19□□□□□ -0.46
CEACAM3P40198 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 AC138951.2-201ENST00000623455 1161 ntBASIC12.19□□□□□ -0.46
CEACAM3P40198 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.19□□□□□ -0.46
CEACAM3P40198 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.19□□□□□ -0.46
CEACAM3P40198 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.19□□□□□ -0.46
CEACAM3P40198 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.19□□□□□ -0.46
CEACAM3P40198 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CEACAM3P40198 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.19□□□□□ -0.46
CEACAM3P40198 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CEACAM3P40198 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CEACAM3P40198 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.19□□□□□ -0.46
CEACAM3P40198 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.19□□□□□ -0.46
CEACAM3P40198 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CEACAM3P40198 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
CEACAM3P40198 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.18□□□□□ -0.46
CEACAM3P40198 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.18□□□□□ -0.46
CEACAM3P40198 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.18□□□□□ -0.46
CEACAM3P40198 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.18□□□□□ -0.46
CEACAM3P40198 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.18□□□□□ -0.46
CEACAM3P40198 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.18□□□□□ -0.46
CEACAM3P40198 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms