Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CLCN1P35523 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.98■□□□□ 0.31
CLCN1P35523 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.98■□□□□ 0.31
CLCN1P35523 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.98■□□□□ 0.31
CLCN1P35523 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CLCN1P35523 MIR6080-201ENST00000617359 66 ntBASIC16.98■□□□□ 0.31
CLCN1P35523 LINC00628-201ENST00000628516 1289 ntBASIC16.98■□□□□ 0.31
CLCN1P35523 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN1P35523 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CLCN1P35523 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.98■□□□□ 0.31
CLCN1P35523 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN1P35523 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN1P35523 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC16.98■□□□□ 0.31
CLCN1P35523 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN1P35523 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN1P35523 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.98■□□□□ 0.31
CLCN1P35523 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN1P35523 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN1P35523 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN1P35523 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCN1P35523 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 AC134407.3-201ENST00000624035 2139 ntBASIC16.97■□□□□ 0.31
CLCN1P35523 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.97■□□□□ 0.31
CLCN1P35523 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CLCN1P35523 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.97■□□□□ 0.31
CLCN1P35523 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CLCN1P35523 NPTN-IT1-201ENST00000628401 2283 ntBASIC16.97■□□□□ 0.31
CLCN1P35523 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.97■□□□□ 0.31
CLCN1P35523 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.97■□□□□ 0.31
CLCN1P35523 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.97■□□□□ 0.31
CLCN1P35523 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.97■□□□□ 0.31
CLCN1P35523 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.97■□□□□ 0.31
CLCN1P35523 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC16.97■□□□□ 0.31
CLCN1P35523 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.97■□□□□ 0.31
CLCN1P35523 AC069262.1-201ENST00000539058 672 ntBASIC16.97■□□□□ 0.31
CLCN1P35523 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.97■□□□□ 0.31
CLCN1P35523 AC023511.2-201ENST00000618803 211 ntBASIC16.97■□□□□ 0.31
CLCN1P35523 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC16.97■□□□□ 0.31
CLCN1P35523 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 AL035456.1-201ENST00000456064 1369 ntBASIC16.97■□□□□ 0.31
CLCN1P35523 KRT8P12-202ENST00000472924 1397 ntBASIC16.97■□□□□ 0.31
CLCN1P35523 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC16.97■□□□□ 0.31
CLCN1P35523 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CLCN1P35523 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CLCN1P35523 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC16.97■□□□□ 0.31
CLCN1P35523 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 KHSRPP1-201ENST00000427983 1768 ntBASIC16.97■□□□□ 0.31
CLCN1P35523 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.97■□□□□ 0.31
CLCN1P35523 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CLCN1P35523 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC16.97■□□□□ 0.31
CLCN1P35523 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLCN1P35523 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN1P35523 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.96■□□□□ 0.31
CLCN1P35523 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CLCN1P35523 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN1P35523 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN1P35523 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN1P35523 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC16.96■□□□□ 0.31
CLCN1P35523 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN1P35523 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CLCN1P35523 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN1P35523 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN1P35523 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN1P35523 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN1P35523 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN1P35523 AC136604.1-201ENST00000418535 575 ntBASIC16.96■□□□□ 0.31
CLCN1P35523 SPDYE7P-202ENST00000420373 878 ntBASIC16.96■□□□□ 0.31
CLCN1P35523 MTND6P24-201ENST00000440466 518 ntBASIC16.96■□□□□ 0.31
CLCN1P35523 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN1P35523 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.96■□□□□ 0.31
CLCN1P35523 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.96■□□□□ 0.31
CLCN1P35523 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN1P35523 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.96■□□□□ 0.31
CLCN1P35523 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CLCN1P35523 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.96■□□□□ 0.31
CLCN1P35523 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
CLCN1P35523 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.96■□□□□ 0.31
CLCN1P35523 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.96■□□□□ 0.31
CLCN1P35523 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.96■□□□□ 0.31
CLCN1P35523 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.96■□□□□ 0.31
CLCN1P35523 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms