Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.73■□□□□ 0.11
CHRNA3P32297 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.73■□□□□ 0.11
CHRNA3P32297 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA3P32297 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA3P32297 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.73■□□□□ 0.11
CHRNA3P32297 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA3P32297 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA3P32297 DRD5P1-201ENST00000456605 1438 ntBASIC15.73■□□□□ 0.11
CHRNA3P32297 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.73■□□□□ 0.11
CHRNA3P32297 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA3P32297 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA3P32297 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA3P32297 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA3P32297 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA3P32297 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.73■□□□□ 0.11
CHRNA3P32297 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.73■□□□□ 0.11
CHRNA3P32297 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CHRNA3P32297 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA3P32297 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CHRNA3P32297 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA3P32297 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.72■□□□□ 0.11
CHRNA3P32297 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA3P32297 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.72■□□□□ 0.11
CHRNA3P32297 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.72■□□□□ 0.11
CHRNA3P32297 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CHRNA3P32297 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA3P32297 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.72■□□□□ 0.11
CHRNA3P32297 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA3P32297 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.72■□□□□ 0.11
CHRNA3P32297 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA3P32297 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA3P32297 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.72■□□□□ 0.11
CHRNA3P32297 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA3P32297 ACTG1P3-201ENST00000431775 1114 ntBASIC15.72■□□□□ 0.11
CHRNA3P32297 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA3P32297 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA3P32297 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.72■□□□□ 0.11
CHRNA3P32297 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.72■□□□□ 0.11
CHRNA3P32297 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.72■□□□□ 0.11
CHRNA3P32297 KRT17P8-201ENST00000540749 863 ntBASIC15.72■□□□□ 0.11
CHRNA3P32297 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.72■□□□□ 0.11
CHRNA3P32297 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.72■□□□□ 0.11
CHRNA3P32297 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.72■□□□□ 0.11
CHRNA3P32297 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.72■□□□□ 0.11
CHRNA3P32297 AC023090.2-201ENST00000625182 2110 ntBASIC15.72■□□□□ 0.11
CHRNA3P32297 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA3P32297 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA3P32297 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.72■□□□□ 0.11
CHRNA3P32297 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.72■□□□□ 0.11
CHRNA3P32297 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.72■□□□□ 0.11
CHRNA3P32297 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA3P32297 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA3P32297 AGGF1P1-201ENST00000509500 2073 ntBASIC15.72■□□□□ 0.11
CHRNA3P32297 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.72■□□□□ 0.11
CHRNA3P32297 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA3P32297 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CHRNA3P32297 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA3P32297 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.72■□□□□ 0.11
CHRNA3P32297 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA3P32297 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CHRNA3P32297 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CHRNA3P32297 MST1P2-201ENST00000457982 2291 ntBASIC15.71■□□□□ 0.11
CHRNA3P32297 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.71■□□□□ 0.11
CHRNA3P32297 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA3P32297 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
CHRNA3P32297 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA3P32297 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.71■□□□□ 0.11
CHRNA3P32297 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA3P32297 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA3P32297 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA3P32297 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA3P32297 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA3P32297 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA3P32297 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.71■□□□□ 0.11
CHRNA3P32297 MBLAC2-202ENST00000514906 1936 ntBASIC15.71■□□□□ 0.11
CHRNA3P32297 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.71■□□□□ 0.11
CHRNA3P32297 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA3P32297 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CHRNA3P32297 ARSEP1-201ENST00000420443 635 ntBASIC15.71■□□□□ 0.11
CHRNA3P32297 AC112492.5-201ENST00000421897 457 ntBASIC15.71■□□□□ 0.11
CHRNA3P32297 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.71■□□□□ 0.11
CHRNA3P32297 GAPDHP40-201ENST00000505218 1006 ntBASIC15.71■□□□□ 0.11
CHRNA3P32297 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA3P32297 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.71■□□□□ 0.11
CHRNA3P32297 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.71■□□□□ 0.11
CHRNA3P32297 TDH-203ENST00000531764 1110 ntBASIC15.71■□□□□ 0.11
CHRNA3P32297 HILS1-202ENST00000545329 423 ntBASIC15.71■□□□□ 0.11
CHRNA3P32297 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.71■□□□□ 0.11
CHRNA3P32297 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA3P32297 RAB43P1-201ENST00000561790 589 ntBASIC15.71■□□□□ 0.11
CHRNA3P32297 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.71■□□□□ 0.11
CHRNA3P32297 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA3P32297 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.71■□□□□ 0.11
CHRNA3P32297 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.71■□□□□ 0.11
CHRNA3P32297 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CHRNA3P32297 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA3P32297 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA3P32297 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CHRNA3P32297 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA3P32297 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms