Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 GAPDHP21-201ENST00000450301 1010 ntBASIC13.76□□□□□ -0.21
BMP4P12644 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.76□□□□□ -0.21
BMP4P12644 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.76□□□□□ -0.21
BMP4P12644 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 TIMM17BP1-201ENST00000545713 516 ntBASIC13.76□□□□□ -0.21
BMP4P12644 BANF1P1-201ENST00000553684 263 ntBASIC13.76□□□□□ -0.21
BMP4P12644 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.76□□□□□ -0.21
BMP4P12644 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.76□□□□□ -0.21
BMP4P12644 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.76□□□□□ -0.21
BMP4P12644 AL844908.2-201ENST00000609461 460 ntBASIC13.76□□□□□ -0.21
BMP4P12644 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.76□□□□□ -0.21
BMP4P12644 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.76□□□□□ -0.21
BMP4P12644 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.76□□□□□ -0.21
BMP4P12644 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
BMP4P12644 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.76□□□□□ -0.21
BMP4P12644 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
BMP4P12644 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 AC018442.1-201ENST00000421439 2061 ntBASIC13.76□□□□□ -0.21
BMP4P12644 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
BMP4P12644 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
BMP4P12644 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BMP4P12644 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.75□□□□□ -0.21
BMP4P12644 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
BMP4P12644 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
BMP4P12644 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.75□□□□□ -0.21
BMP4P12644 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.75□□□□□ -0.21
BMP4P12644 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.75□□□□□ -0.21
BMP4P12644 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.75□□□□□ -0.21
BMP4P12644 CU639417.3-201ENST00000624240 1404 ntBASIC13.75□□□□□ -0.21
BMP4P12644 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.75□□□□□ -0.21
BMP4P12644 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
BMP4P12644 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.75□□□□□ -0.21
BMP4P12644 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
BMP4P12644 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.75□□□□□ -0.21
BMP4P12644 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.75□□□□□ -0.21
BMP4P12644 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.75□□□□□ -0.21
BMP4P12644 AC011495.1-201ENST00000498085 584 ntBASIC13.75□□□□□ -0.21
BMP4P12644 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.75□□□□□ -0.21
BMP4P12644 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.75□□□□□ -0.21
BMP4P12644 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
BMP4P12644 AC009407.1-201ENST00000568958 598 ntBASIC13.75□□□□□ -0.21
BMP4P12644 AC140912.1-201ENST00000577171 1054 ntBASIC13.75□□□□□ -0.21
BMP4P12644 SPDYE22P-201ENST00000582158 798 ntBASIC13.75□□□□□ -0.21
BMP4P12644 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.75□□□□□ -0.21
BMP4P12644 AC025048.6-201ENST00000634326 1161 ntBASIC13.75□□□□□ -0.21
BMP4P12644 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
BMP4P12644 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.75□□□□□ -0.21
BMP4P12644 AC020658.7-201ENST00000624274 2442 ntBASIC13.75□□□□□ -0.21
BMP4P12644 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
BMP4P12644 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
BMP4P12644 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BMP4P12644 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
BMP4P12644 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.74□□□□□ -0.21
BMP4P12644 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.74□□□□□ -0.21
BMP4P12644 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.74□□□□□ -0.21
BMP4P12644 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
BMP4P12644 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BMP4P12644 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
BMP4P12644 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.74□□□□□ -0.21
BMP4P12644 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.74□□□□□ -0.21
BMP4P12644 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.74□□□□□ -0.21
BMP4P12644 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.74□□□□□ -0.21
BMP4P12644 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
BMP4P12644 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
BMP4P12644 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
BMP4P12644 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.74□□□□□ -0.21
BMP4P12644 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.74□□□□□ -0.21
BMP4P12644 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BMP4P12644 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BMP4P12644 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BMP4P12644 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.74□□□□□ -0.21
BMP4P12644 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms