Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS1P07996 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.71□□□□□ -0.21
THBS1P07996 AC067750.1-201ENST00000608826 6545 ntBASIC13.71□□□□□ -0.21
THBS1P07996 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS1P07996 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS1P07996 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
THBS1P07996 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS1P07996 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS1P07996 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
THBS1P07996 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS1P07996 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS1P07996 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS1P07996 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS1P07996 AC079776.1-201ENST00000401540 1152 ntBASIC13.71□□□□□ -0.21
THBS1P07996 POM121L8P-201ENST00000417732 1281 ntBASIC13.71□□□□□ -0.21
THBS1P07996 POM121L9P-203ENST00000441984 1285 ntBASIC13.71□□□□□ -0.21
THBS1P07996 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.71□□□□□ -0.21
THBS1P07996 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
THBS1P07996 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.71□□□□□ -0.21
THBS1P07996 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.71□□□□□ -0.21
THBS1P07996 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.71□□□□□ -0.21
THBS1P07996 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS1P07996 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.71□□□□□ -0.21
THBS1P07996 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.71□□□□□ -0.21
THBS1P07996 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.71□□□□□ -0.21
THBS1P07996 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.71□□□□□ -0.21
THBS1P07996 AL390728.6-201ENST00000566446 1246 ntBASIC13.71□□□□□ -0.21
THBS1P07996 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.71□□□□□ -0.21
THBS1P07996 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.71□□□□□ -0.21
THBS1P07996 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.71□□□□□ -0.21
THBS1P07996 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.71□□□□□ -0.21
THBS1P07996 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
THBS1P07996 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
THBS1P07996 AL162274.1-201ENST00000617191 1098 ntBASIC13.71□□□□□ -0.21
THBS1P07996 ENPP7P14-201ENST00000621765 1040 ntBASIC13.71□□□□□ -0.21
THBS1P07996 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.71□□□□□ -0.21
THBS1P07996 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS1P07996 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.71□□□□□ -0.21
THBS1P07996 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS1P07996 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THBS1P07996 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
THBS1P07996 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.71□□□□□ -0.21
THBS1P07996 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
THBS1P07996 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
THBS1P07996 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
THBS1P07996 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
THBS1P07996 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
THBS1P07996 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.71□□□□□ -0.22
THBS1P07996 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
THBS1P07996 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
THBS1P07996 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
THBS1P07996 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
THBS1P07996 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
THBS1P07996 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
THBS1P07996 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.7□□□□□ -0.22
THBS1P07996 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.7□□□□□ -0.22
THBS1P07996 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
THBS1P07996 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
THBS1P07996 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 AC011840.2-201ENST00000563063 1520 ntBASIC13.7□□□□□ -0.22
THBS1P07996 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
THBS1P07996 CLUHP2-201ENST00000426660 1303 ntBASIC13.7□□□□□ -0.22
THBS1P07996 AC134312.5-201ENST00000568031 1313 ntBASIC13.7□□□□□ -0.22
THBS1P07996 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.7□□□□□ -0.22
THBS1P07996 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
THBS1P07996 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
THBS1P07996 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.7□□□□□ -0.22
THBS1P07996 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
THBS1P07996 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
THBS1P07996 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
THBS1P07996 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.7□□□□□ -0.22
THBS1P07996 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 ATP5G2P4-201ENST00000442175 420 ntBASIC13.7□□□□□ -0.22
THBS1P07996 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
THBS1P07996 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.7□□□□□ -0.22
THBS1P07996 ALG3P1-201ENST00000508806 1114 ntBASIC13.7□□□□□ -0.22
THBS1P07996 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
THBS1P07996 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
THBS1P07996 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.7□□□□□ -0.22
THBS1P07996 ADAM3B-201ENST00000569937 840 ntBASIC13.7□□□□□ -0.22
THBS1P07996 MIR5189-201ENST00000577370 114 ntBASIC13.7□□□□□ -0.22
THBS1P07996 AC145423.3-201ENST00000615987 467 ntBASIC13.7□□□□□ -0.22
THBS1P07996 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
THBS1P07996 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
THBS1P07996 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.7□□□□□ -0.22
THBS1P07996 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
THBS1P07996 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms