Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CAPNS1P04632 AC006453.4-201ENST00000636949 1252 ntBASIC14.84□□□□□ -0.03
CAPNS1P04632 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CAPNS1P04632 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
CAPNS1P04632 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.84□□□□□ -0.03
CAPNS1P04632 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPNS1P04632 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPNS1P04632 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
CAPNS1P04632 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPNS1P04632 TUBBP5-203ENST00000508529 1334 ntBASIC14.84□□□□□ -0.03
CAPNS1P04632 AC006480.2-201ENST00000609770 1337 ntBASIC14.84□□□□□ -0.03
CAPNS1P04632 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPNS1P04632 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPNS1P04632 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPNS1P04632 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPNS1P04632 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CAPNS1P04632 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPNS1P04632 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CAPNS1P04632 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CAPNS1P04632 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
CAPNS1P04632 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CAPNS1P04632 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.83□□□□□ -0.03
CAPNS1P04632 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CAPNS1P04632 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CAPNS1P04632 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CAPNS1P04632 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.83□□□□□ -0.04
CAPNS1P04632 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.83□□□□□ -0.04
CAPNS1P04632 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
CAPNS1P04632 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
CAPNS1P04632 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.83□□□□□ -0.04
CAPNS1P04632 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.83□□□□□ -0.04
CAPNS1P04632 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.83□□□□□ -0.04
CAPNS1P04632 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.83□□□□□ -0.04
CAPNS1P04632 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CAPNS1P04632 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.83□□□□□ -0.04
CAPNS1P04632 MIR769-201ENST00000390225 118 ntBASIC14.83□□□□□ -0.04
CAPNS1P04632 AC004987.2-201ENST00000395959 1148 ntBASIC14.83□□□□□ -0.04
CAPNS1P04632 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.83□□□□□ -0.04
CAPNS1P04632 MIR1202-201ENST00000408529 83 ntBASIC14.83□□□□□ -0.04
CAPNS1P04632 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.83□□□□□ -0.04
CAPNS1P04632 NKAIN1P1-201ENST00000435754 582 ntBASIC14.83□□□□□ -0.04
CAPNS1P04632 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.83□□□□□ -0.04
CAPNS1P04632 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.83□□□□□ -0.04
CAPNS1P04632 KRT18P66-201ENST00000452970 1269 ntBASIC14.83□□□□□ -0.04
CAPNS1P04632 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.83□□□□□ -0.04
CAPNS1P04632 RN7SL574P-201ENST00000581512 297 ntBASIC14.83□□□□□ -0.04
CAPNS1P04632 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.83□□□□□ -0.04
CAPNS1P04632 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.83□□□□□ -0.04
CAPNS1P04632 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CAPNS1P04632 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.83□□□□□ -0.04
CAPNS1P04632 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.83□□□□□ -0.04
CAPNS1P04632 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 AL691432.1-201ENST00000596308 1422 ntBASIC14.83□□□□□ -0.04
CAPNS1P04632 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPNS1P04632 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CAPNS1P04632 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
CAPNS1P04632 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPNS1P04632 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CAPNS1P04632 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPNS1P04632 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPNS1P04632 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.82□□□□□ -0.04
CAPNS1P04632 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CAPNS1P04632 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.82□□□□□ -0.04
CAPNS1P04632 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPNS1P04632 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPNS1P04632 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPNS1P04632 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPNS1P04632 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CAPNS1P04632 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.82□□□□□ -0.04
CAPNS1P04632 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
CAPNS1P04632 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPNS1P04632 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPNS1P04632 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.82□□□□□ -0.04
CAPNS1P04632 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CAPNS1P04632 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPNS1P04632 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms